Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC24.21■■□□□ 1.47
CCDC196A0A1B0GTZ2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC24.21■■□□□ 1.47
CCDC196A0A1B0GTZ2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
CCDC196A0A1B0GTZ2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
CCDC196A0A1B0GTZ2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CCDC196A0A1B0GTZ2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CCDC196A0A1B0GTZ2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CCDC196A0A1B0GTZ2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC24.2■■□□□ 1.46
CCDC196A0A1B0GTZ2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CCDC196A0A1B0GTZ2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC24.2■■□□□ 1.46
CCDC196A0A1B0GTZ2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC24.2■■□□□ 1.46
CCDC196A0A1B0GTZ2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC24.2■■□□□ 1.46
CCDC196A0A1B0GTZ2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CCDC196A0A1B0GTZ2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CCDC196A0A1B0GTZ2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CCDC196A0A1B0GTZ2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CCDC196A0A1B0GTZ2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CCDC196A0A1B0GTZ2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC24.2■■□□□ 1.46
CCDC196A0A1B0GTZ2 RBM17P2-201ENST00000616397 1405 ntBASIC24.19■■□□□ 1.46
CCDC196A0A1B0GTZ2 AC006015.1-201ENST00000429970 570 ntBASIC24.19■■□□□ 1.46
CCDC196A0A1B0GTZ2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC24.19■■□□□ 1.46
CCDC196A0A1B0GTZ2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC24.19■■□□□ 1.46
CCDC196A0A1B0GTZ2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC24.19■■□□□ 1.46
CCDC196A0A1B0GTZ2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CCDC196A0A1B0GTZ2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC24.19■■□□□ 1.46
CCDC196A0A1B0GTZ2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
CCDC196A0A1B0GTZ2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC24.18■■□□□ 1.46
CCDC196A0A1B0GTZ2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC24.18■■□□□ 1.46
CCDC196A0A1B0GTZ2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
CCDC196A0A1B0GTZ2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC196A0A1B0GTZ2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC24.18■■□□□ 1.46
CCDC196A0A1B0GTZ2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC24.18■■□□□ 1.46
CCDC196A0A1B0GTZ2 AC022517.1-201ENST00000592429 346 ntBASIC24.18■■□□□ 1.46
CCDC196A0A1B0GTZ2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC24.18■■□□□ 1.46
CCDC196A0A1B0GTZ2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC196A0A1B0GTZ2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC24.18■■□□□ 1.46
CCDC196A0A1B0GTZ2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC196A0A1B0GTZ2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC24.17■■□□□ 1.46
CCDC196A0A1B0GTZ2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC24.17■■□□□ 1.46
CCDC196A0A1B0GTZ2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC24.17■■□□□ 1.46
CCDC196A0A1B0GTZ2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
CCDC196A0A1B0GTZ2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC24.17■■□□□ 1.46
CCDC196A0A1B0GTZ2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC24.17■■□□□ 1.46
CCDC196A0A1B0GTZ2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC24.17■■□□□ 1.46
CCDC196A0A1B0GTZ2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC24.17■■□□□ 1.46
CCDC196A0A1B0GTZ2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC196A0A1B0GTZ2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC196A0A1B0GTZ2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC196A0A1B0GTZ2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
CCDC196A0A1B0GTZ2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC196A0A1B0GTZ2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC196A0A1B0GTZ2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC24.16■■□□□ 1.46
CCDC196A0A1B0GTZ2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
CCDC196A0A1B0GTZ2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
CCDC196A0A1B0GTZ2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC24.16■■□□□ 1.46
CCDC196A0A1B0GTZ2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC24.16■■□□□ 1.46
CCDC196A0A1B0GTZ2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC24.16■■□□□ 1.46
CCDC196A0A1B0GTZ2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC24.16■■□□□ 1.46
CCDC196A0A1B0GTZ2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC196A0A1B0GTZ2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
CCDC196A0A1B0GTZ2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC24.16■■□□□ 1.46
CCDC196A0A1B0GTZ2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC196A0A1B0GTZ2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC196A0A1B0GTZ2 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
CCDC196A0A1B0GTZ2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC24.15■■□□□ 1.46
CCDC196A0A1B0GTZ2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC196A0A1B0GTZ2 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC196A0A1B0GTZ2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC24.15■■□□□ 1.46
CCDC196A0A1B0GTZ2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.15■■□□□ 1.46
CCDC196A0A1B0GTZ2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC196A0A1B0GTZ2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
CCDC196A0A1B0GTZ2 AC010536.3-201ENST00000620306 533 ntBASIC24.15■■□□□ 1.46
CCDC196A0A1B0GTZ2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC24.15■■□□□ 1.46
CCDC196A0A1B0GTZ2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
CCDC196A0A1B0GTZ2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC24.15■■□□□ 1.46
CCDC196A0A1B0GTZ2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC196A0A1B0GTZ2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC24.15■■□□□ 1.46
CCDC196A0A1B0GTZ2 GAS2L1P2-201ENST00000436355 1356 ntBASIC24.15■■□□□ 1.46
CCDC196A0A1B0GTZ2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
CCDC196A0A1B0GTZ2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC24.14■■□□□ 1.46
CCDC196A0A1B0GTZ2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CCDC196A0A1B0GTZ2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
CCDC196A0A1B0GTZ2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CCDC196A0A1B0GTZ2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC24.14■■□□□ 1.46
CCDC196A0A1B0GTZ2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CCDC196A0A1B0GTZ2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC24.14■■□□□ 1.45
CCDC196A0A1B0GTZ2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CCDC196A0A1B0GTZ2 AC121338.2-201ENST00000622535 1744 ntBASIC24.14■■□□□ 1.45
CCDC196A0A1B0GTZ2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
CCDC196A0A1B0GTZ2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
CCDC196A0A1B0GTZ2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CCDC196A0A1B0GTZ2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CCDC196A0A1B0GTZ2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CCDC196A0A1B0GTZ2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC24.14■■□□□ 1.45
CCDC196A0A1B0GTZ2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CCDC196A0A1B0GTZ2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CCDC196A0A1B0GTZ2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CCDC196A0A1B0GTZ2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC24.13■■□□□ 1.45
CCDC196A0A1B0GTZ2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC24.13■■□□□ 1.45
CCDC196A0A1B0GTZ2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms