Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF103-CHMP3A0A140T963 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF103-CHMP3A0A140T963 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RNF103-CHMP3A0A140T963 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF103-CHMP3A0A140T963 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.94■□□□□ 0.78
RNF103-CHMP3A0A140T963 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF103-CHMP3A0A140T963 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF103-CHMP3A0A140T963 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF103-CHMP3A0A140T963 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF103-CHMP3A0A140T963 AC008764.7-201ENST00000593779 1081 ntBASIC19.94■□□□□ 0.78
RNF103-CHMP3A0A140T963 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF103-CHMP3A0A140T963 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.94■□□□□ 0.78
RNF103-CHMP3A0A140T963 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RNF103-CHMP3A0A140T963 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF103-CHMP3A0A140T963 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF103-CHMP3A0A140T963 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RNF103-CHMP3A0A140T963 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
RNF103-CHMP3A0A140T963 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF103-CHMP3A0A140T963 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.93■□□□□ 0.78
RNF103-CHMP3A0A140T963 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.93■□□□□ 0.78
RNF103-CHMP3A0A140T963 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF103-CHMP3A0A140T963 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF103-CHMP3A0A140T963 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF103-CHMP3A0A140T963 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF103-CHMP3A0A140T963 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
RNF103-CHMP3A0A140T963 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF103-CHMP3A0A140T963 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF103-CHMP3A0A140T963 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RNF103-CHMP3A0A140T963 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.93■□□□□ 0.78
RNF103-CHMP3A0A140T963 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF103-CHMP3A0A140T963 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF103-CHMP3A0A140T963 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RNF103-CHMP3A0A140T963 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF103-CHMP3A0A140T963 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF103-CHMP3A0A140T963 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF103-CHMP3A0A140T963 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RNF103-CHMP3A0A140T963 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF103-CHMP3A0A140T963 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF103-CHMP3A0A140T963 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.92■□□□□ 0.78
RNF103-CHMP3A0A140T963 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF103-CHMP3A0A140T963 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF103-CHMP3A0A140T963 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF103-CHMP3A0A140T963 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RNF103-CHMP3A0A140T963 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF103-CHMP3A0A140T963 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RNF103-CHMP3A0A140T963 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF103-CHMP3A0A140T963 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF103-CHMP3A0A140T963 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF103-CHMP3A0A140T963 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RNF103-CHMP3A0A140T963 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF103-CHMP3A0A140T963 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF103-CHMP3A0A140T963 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF103-CHMP3A0A140T963 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.92■□□□□ 0.78
RNF103-CHMP3A0A140T963 PBX2P1-201ENST00000493219 1291 ntBASIC19.92■□□□□ 0.78
RNF103-CHMP3A0A140T963 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF103-CHMP3A0A140T963 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RNF103-CHMP3A0A140T963 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF103-CHMP3A0A140T963 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF103-CHMP3A0A140T963 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF103-CHMP3A0A140T963 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF103-CHMP3A0A140T963 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF103-CHMP3A0A140T963 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF103-CHMP3A0A140T963 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF103-CHMP3A0A140T963 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF103-CHMP3A0A140T963 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF103-CHMP3A0A140T963 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF103-CHMP3A0A140T963 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
RNF103-CHMP3A0A140T963 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF103-CHMP3A0A140T963 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
RNF103-CHMP3A0A140T963 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF103-CHMP3A0A140T963 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF103-CHMP3A0A140T963 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF103-CHMP3A0A140T963 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF103-CHMP3A0A140T963 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF103-CHMP3A0A140T963 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF103-CHMP3A0A140T963 AC099791.1-201ENST00000416440 715 ntBASIC19.91■□□□□ 0.78
RNF103-CHMP3A0A140T963 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.91■□□□□ 0.78
RNF103-CHMP3A0A140T963 AC027682.1-201ENST00000562846 899 ntBASIC19.91■□□□□ 0.78
RNF103-CHMP3A0A140T963 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF103-CHMP3A0A140T963 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF103-CHMP3A0A140T963 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF103-CHMP3A0A140T963 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF103-CHMP3A0A140T963 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF103-CHMP3A0A140T963 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF103-CHMP3A0A140T963 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF103-CHMP3A0A140T963 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
RNF103-CHMP3A0A140T963 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
RNF103-CHMP3A0A140T963 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RNF103-CHMP3A0A140T963 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RNF103-CHMP3A0A140T963 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF103-CHMP3A0A140T963 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RNF103-CHMP3A0A140T963 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF103-CHMP3A0A140T963 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF103-CHMP3A0A140T963 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
RNF103-CHMP3A0A140T963 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF103-CHMP3A0A140T963 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF103-CHMP3A0A140T963 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF103-CHMP3A0A140T963 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.9■□□□□ 0.78
RNF103-CHMP3A0A140T963 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.9■□□□□ 0.78
RNF103-CHMP3A0A140T963 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms