Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
TRAV10A0A0B4J240 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV10A0A0B4J240 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV10A0A0B4J240 AC026471.6-201ENST00000622954 1905 ntBASIC14.67□□□□□ -0.06
TRAV10A0A0B4J240 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV10A0A0B4J240 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV10A0A0B4J240 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV10A0A0B4J240 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV10A0A0B4J240 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV10A0A0B4J240 FAM201B-201ENST00000458407 597 ntBASIC14.67□□□□□ -0.06
TRAV10A0A0B4J240 AC097658.1-201ENST00000475555 843 ntBASIC14.67□□□□□ -0.06
TRAV10A0A0B4J240 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.67□□□□□ -0.06
TRAV10A0A0B4J240 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TRAV10A0A0B4J240 AC098934.4-201ENST00000564127 592 ntBASIC14.67□□□□□ -0.06
TRAV10A0A0B4J240 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV10A0A0B4J240 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAV10A0A0B4J240 TMEM191A-211ENST00000637163 1067 ntBASIC14.67□□□□□ -0.06
TRAV10A0A0B4J240 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV10A0A0B4J240 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
TRAV10A0A0B4J240 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV10A0A0B4J240 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV10A0A0B4J240 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV10A0A0B4J240 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV10A0A0B4J240 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRAV10A0A0B4J240 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TRAV10A0A0B4J240 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV10A0A0B4J240 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV10A0A0B4J240 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV10A0A0B4J240 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV10A0A0B4J240 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV10A0A0B4J240 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV10A0A0B4J240 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV10A0A0B4J240 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV10A0A0B4J240 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV10A0A0B4J240 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
TRAV10A0A0B4J240 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV10A0A0B4J240 LSM12P1-201ENST00000411836 588 ntBASIC14.66□□□□□ -0.06
TRAV10A0A0B4J240 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV10A0A0B4J240 AC091799.1-201ENST00000422823 811 ntBASIC14.66□□□□□ -0.06
TRAV10A0A0B4J240 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV10A0A0B4J240 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV10A0A0B4J240 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV10A0A0B4J240 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV10A0A0B4J240 C11orf96-202ENST00000528572 1834 ntBASIC14.66□□□□□ -0.06
TRAV10A0A0B4J240 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRAV10A0A0B4J240 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV10A0A0B4J240 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV10A0A0B4J240 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV10A0A0B4J240 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV10A0A0B4J240 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV10A0A0B4J240 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV10A0A0B4J240 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TRAV10A0A0B4J240 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV10A0A0B4J240 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV10A0A0B4J240 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV10A0A0B4J240 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV10A0A0B4J240 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV10A0A0B4J240 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV10A0A0B4J240 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
TRAV10A0A0B4J240 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV10A0A0B4J240 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TRAV10A0A0B4J240 TSPY20P-201ENST00000450910 630 ntBASIC14.65□□□□□ -0.06
TRAV10A0A0B4J240 RNA5SP413-201ENST00000516373 109 ntBASIC14.65□□□□□ -0.06
TRAV10A0A0B4J240 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV10A0A0B4J240 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TRAV10A0A0B4J240 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV10A0A0B4J240 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV10A0A0B4J240 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV10A0A0B4J240 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV10A0A0B4J240 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV10A0A0B4J240 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV10A0A0B4J240 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV10A0A0B4J240 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV10A0A0B4J240 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.07
TRAV10A0A0B4J240 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV10A0A0B4J240 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
TRAV10A0A0B4J240 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV10A0A0B4J240 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV10A0A0B4J240 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV10A0A0B4J240 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV10A0A0B4J240 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV10A0A0B4J240 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV10A0A0B4J240 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV10A0A0B4J240 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV10A0A0B4J240 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV10A0A0B4J240 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV10A0A0B4J240 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV10A0A0B4J240 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.64□□□□□ -0.07
TRAV10A0A0B4J240 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRAV10A0A0B4J240 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TRAV10A0A0B4J240 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV10A0A0B4J240 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC14.64□□□□□ -0.07
TRAV10A0A0B4J240 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV10A0A0B4J240 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
TRAV10A0A0B4J240 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV10A0A0B4J240 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC14.64□□□□□ -0.07
TRAV10A0A0B4J240 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC14.64□□□□□ -0.07
TRAV10A0A0B4J240 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV10A0A0B4J240 AC100791.3-201ENST00000617619 330 ntBASIC14.64□□□□□ -0.07
TRAV10A0A0B4J240 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms