Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV27A0A087WT01 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.83■□□□□ 0.61
TRAV27A0A087WT01 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV27A0A087WT01 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV27A0A087WT01 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.83■□□□□ 0.6
TRAV27A0A087WT01 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV27A0A087WT01 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.83■□□□□ 0.6
TRAV27A0A087WT01 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TRAV27A0A087WT01 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV27A0A087WT01 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV27A0A087WT01 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV27A0A087WT01 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV27A0A087WT01 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV27A0A087WT01 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV27A0A087WT01 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
TRAV27A0A087WT01 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV27A0A087WT01 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.82■□□□□ 0.6
TRAV27A0A087WT01 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TRAV27A0A087WT01 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV27A0A087WT01 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.82■□□□□ 0.6
TRAV27A0A087WT01 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.82■□□□□ 0.6
TRAV27A0A087WT01 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV27A0A087WT01 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV27A0A087WT01 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.82■□□□□ 0.6
TRAV27A0A087WT01 EEF1DP3-203ENST00000566025 782 ntBASIC18.82■□□□□ 0.6
TRAV27A0A087WT01 TPRG1LP1-201ENST00000598702 760 ntBASIC18.82■□□□□ 0.6
TRAV27A0A087WT01 AL354811.1-201ENST00000610286 706 ntBASIC18.82■□□□□ 0.6
TRAV27A0A087WT01 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.82■□□□□ 0.6
TRAV27A0A087WT01 MIR6084-201ENST00000622012 110 ntBASIC18.82■□□□□ 0.6
TRAV27A0A087WT01 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.82■□□□□ 0.6
TRAV27A0A087WT01 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAV27A0A087WT01 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV27A0A087WT01 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV27A0A087WT01 AC073314.1-201ENST00000568729 2216 ntBASIC18.82■□□□□ 0.6
TRAV27A0A087WT01 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV27A0A087WT01 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TRAV27A0A087WT01 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV27A0A087WT01 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV27A0A087WT01 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV27A0A087WT01 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.82■□□□□ 0.6
TRAV27A0A087WT01 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV27A0A087WT01 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV27A0A087WT01 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRAV27A0A087WT01 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV27A0A087WT01 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV27A0A087WT01 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRAV27A0A087WT01 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAV27A0A087WT01 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.81■□□□□ 0.6
TRAV27A0A087WT01 AC142381.2-201ENST00000566120 298 ntBASIC18.81■□□□□ 0.6
TRAV27A0A087WT01 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.81■□□□□ 0.6
TRAV27A0A087WT01 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
TRAV27A0A087WT01 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAV27A0A087WT01 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRAV27A0A087WT01 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAV27A0A087WT01 AC061975.6-201ENST00000579045 1553 ntBASIC18.81■□□□□ 0.6
TRAV27A0A087WT01 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV27A0A087WT01 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV27A0A087WT01 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV27A0A087WT01 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAV27A0A087WT01 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV27A0A087WT01 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.8■□□□□ 0.6
TRAV27A0A087WT01 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV27A0A087WT01 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.8■□□□□ 0.6
TRAV27A0A087WT01 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV27A0A087WT01 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV27A0A087WT01 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAV27A0A087WT01 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.8■□□□□ 0.6
TRAV27A0A087WT01 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.8■□□□□ 0.6
TRAV27A0A087WT01 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV27A0A087WT01 AC053503.5-201ENST00000601508 636 ntBASIC18.8■□□□□ 0.6
TRAV27A0A087WT01 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV27A0A087WT01 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV27A0A087WT01 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV27A0A087WT01 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV27A0A087WT01 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV27A0A087WT01 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TRAV27A0A087WT01 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV27A0A087WT01 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV27A0A087WT01 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV27A0A087WT01 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV27A0A087WT01 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.79■□□□□ 0.6
TRAV27A0A087WT01 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV27A0A087WT01 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV27A0A087WT01 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAV27A0A087WT01 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAV27A0A087WT01 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV27A0A087WT01 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV27A0A087WT01 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV27A0A087WT01 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV27A0A087WT01 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV27A0A087WT01 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV27A0A087WT01 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TRAV27A0A087WT01 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV27A0A087WT01 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRAV27A0A087WT01 AP005212.1-201ENST00000581547 1997 ntBASIC18.79■□□□□ 0.6
TRAV27A0A087WT01 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV27A0A087WT01 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV27A0A087WT01 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV27A0A087WT01 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV27A0A087WT01 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms