Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CHP1-204ENST00000560397 568 ntTSL 3 BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 SPATA8-AS1-202ENST00000560888 392 ntTSL 5 BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 AC009075.2-201ENST00000568483 301 ntBASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 LINC01982-201ENST00000572848 308 ntTSL 5 BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 AC068473.2-201ENST00000587315 474 ntTSL 3 BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 ZNF814-212ENST00000597807 771 ntTSL 2 BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 RPS16-207ENST00000601655 492 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 AC091393.1-201ENST00000605088 598 ntBASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 AC022400.7-201ENST00000625041 1236 ntBASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 EFHC1-214ENST00000636107 3530 ntTSL 5 BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 ZNF417-201ENST00000312026 3597 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 KCNA10-201ENST00000369771 1959 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 COMMD9-201ENST00000263401 2954 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 IL1RAPL1-201ENST00000302196 1314 ntTSL 5 BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 ENO1P1-201ENST00000366587 1304 ntBASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 USP28-201ENST00000003302 4669 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 SH2D4A-202ENST00000518040 1697 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 ACOXL-AS1-201ENST00000376593 3026 ntTSL 2 BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 HRH1-204ENST00000438284 2080 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 SPATA41-202ENST00000560282 2072 ntTSL 2 BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 WDR93-201ENST00000268130 2409 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 CSMD1-202ENST00000400186 10938 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 CSMD1-217ENST00000602723 10938 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 NSUN7-201ENST00000316607 3546 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 PCDHGC3-202ENST00000611950 2849 ntAPPRIS ALT2 BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 CHEK1-206ENST00000524737 1799 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 RASGRP1-206ENST00000558164 1757 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 ENO4-205ENST00000622726 2874 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 SETD4-206ENST00000399212 3258 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 CEP63-203ENST00000354446 1835 ntTSL 2 BASIC9.21□□□□□ -0.93
NPIPA3F8WFD2 VOPP1-208ENST00000433959 2900 ntTSL 2 BASIC9.21□□□□□ -0.93
NPIPA3F8WFD2 WDR55-201ENST00000358337 4080 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
NPIPA3F8WFD2 NCAM1-226ENST00000619839 2993 ntTSL 5 BASIC9.21□□□□□ -0.93
NPIPA3F8WFD2 NLRP1-215ENST00000613500 4494 ntTSL 5 BASIC9.21□□□□□ -0.93
NPIPA3F8WFD2 PABPC1P4-201ENST00000539977 1875 ntBASIC9.21□□□□□ -0.93
NPIPA3F8WFD2 SCAF11-205ENST00000465950 5296 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
NPIPA3F8WFD2 ZNF433-201ENST00000344980 2280 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
NPIPA3F8WFD2 SETBP1-201ENST00000282030 9899 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
NPIPA3F8WFD2 CD36-202ENST00000394788 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
NPIPA3F8WFD2 AF131215.5-201ENST00000530248 1939 ntBASIC9.21□□□□□ -0.93
NPIPA3F8WFD2 AC016708.1-201ENST00000607412 1909 ntTSL 2 BASIC9.21□□□□□ -0.93
NPIPA3F8WFD2 C2orf71-201ENST00000331664 7044 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
NPIPA3F8WFD2 GANAB-201ENST00000346178 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
NPIPA3F8WFD2 MCF2-209ENST00000520602 3945 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
NPIPA3F8WFD2 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
NPIPA3F8WFD2 FPR1-203ENST00000595042 1965 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
NPIPA3F8WFD2 LINC00968-201ENST00000499425 2366 ntTSL 2 BASIC9.21□□□□□ -0.93
NPIPA3F8WFD2 PADI3-201ENST00000375460 3189 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
NPIPA3F8WFD2 BHLHB9-201ENST00000361229 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
NPIPA3F8WFD2 EARS2-201ENST00000449606 3961 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
NPIPA3F8WFD2 FRG2C-202ENST00000464571 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
NPIPA3F8WFD2 RBPJ-208ENST00000504907 1682 ntTSL 5 BASIC9.21□□□□□ -0.93
NPIPA3F8WFD2 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 HSPB11-203ENST00000371377 760 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 LHFPL3-AS1-202ENST00000416376 866 ntTSL 3 BASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 ADAM1A-201ENST00000424240 2129 ntBASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 AL445490.1-201ENST00000430683 489 ntTSL 3 BASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 AL590068.1-201ENST00000440932 541 ntTSL 2 BASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 CDCA4P1-201ENST00000442667 624 ntBASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 UBE2F-SCLY-201ENST00000449191 951 ntAPPRIS P5 TSL 3 BASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 RN7SL446P-201ENST00000476053 296 ntBASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 RN7SL211P-201ENST00000485246 276 ntBASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 RN7SL209P-201ENST00000488309 276 ntBASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 AC022784.6-205ENST00000518619 807 ntTSL 3 BASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 IGHV1-67-201ENST00000519713 357 ntBASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 OR1D4-202ENST00000531680 642 ntBASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 AC104770.1-202ENST00000573698 325 ntTSL 2 BASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 LINC01912-201ENST00000581844 496 ntTSL 5 BASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 ZNF611-207ENST00000596702 538 ntTSL 4 BASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 CLEC4M-209ENST00000596707 999 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 AC012313.7-201ENST00000598051 409 ntBASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 AC245297.3-201ENST00000611769 838 ntTSL 5 BASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 KLHL20-201ENST00000209884 3421 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 AC009336.3-201ENST00000623777 2620 ntBASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 EIF1AX-202ENST00000379607 4427 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 OR51S1-201ENST00000322101 1750 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 KCTD21-AS1-201ENST00000500113 1789 ntTSL 2 BASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 ITSN1-207ENST00000399338 3115 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 ADD1-217ENST00000513328 3107 ntTSL 5 BASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 EMP1-201ENST00000256951 5921 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 DCLK1-202ENST00000360631 8007 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 HSPA9-201ENST00000297185 3321 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 MBIP-202ENST00000359527 1449 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 BHLHB9-204ENST00000448867 3936 ntAPPRIS P1 TSL 4 BASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 GPATCH4-201ENST00000368232 1972 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 AMOTL1-203ENST00000433060 8970 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
NPIPA3F8WFD2 AC007342.6-201ENST00000624289 2594 ntBASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 KDM2A-201ENST00000308783 3666 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 PTPRB-204ENST00000538708 5839 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 CD44-210ENST00000434472 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 SLC4A9-205ENST00000507527 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 SLC44A2-202ENST00000407327 3301 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 TMEM169-205ENST00000454545 3460 ntAPPRIS P1 TSL 4 BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 ST3GAL5-254ENST00000640322 2368 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 UQCC1-205ENST00000374385 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 OR2AJ1-201ENST00000318244 1873 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 PPY-201ENST00000225992 460 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms