Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.66■□□□□ 0.26
LSM4Q9Y4Z0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSM4Q9Y4Z0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LSM4Q9Y4Z0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LSM4Q9Y4Z0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSM4Q9Y4Z0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
LSM4Q9Y4Z0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LSM4Q9Y4Z0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.65■□□□□ 0.26
LSM4Q9Y4Z0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSM4Q9Y4Z0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.65■□□□□ 0.26
LSM4Q9Y4Z0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSM4Q9Y4Z0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSM4Q9Y4Z0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSM4Q9Y4Z0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
LSM4Q9Y4Z0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LSM4Q9Y4Z0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.65■□□□□ 0.26
LSM4Q9Y4Z0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.65■□□□□ 0.26
LSM4Q9Y4Z0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.65■□□□□ 0.26
LSM4Q9Y4Z0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LSM4Q9Y4Z0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.65■□□□□ 0.26
LSM4Q9Y4Z0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.65■□□□□ 0.26
LSM4Q9Y4Z0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LSM4Q9Y4Z0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSM4Q9Y4Z0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSM4Q9Y4Z0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
LSM4Q9Y4Z0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSM4Q9Y4Z0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSM4Q9Y4Z0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSM4Q9Y4Z0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSM4Q9Y4Z0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LSM4Q9Y4Z0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LSM4Q9Y4Z0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.64■□□□□ 0.25
LSM4Q9Y4Z0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.64■□□□□ 0.25
LSM4Q9Y4Z0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSM4Q9Y4Z0 GABARAPL3-202ENST00000624044 1851 ntBASIC16.64■□□□□ 0.25
LSM4Q9Y4Z0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.64■□□□□ 0.25
LSM4Q9Y4Z0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LSM4Q9Y4Z0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LSM4Q9Y4Z0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
LSM4Q9Y4Z0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSM4Q9Y4Z0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LSM4Q9Y4Z0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
LSM4Q9Y4Z0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSM4Q9Y4Z0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LSM4Q9Y4Z0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSM4Q9Y4Z0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.63■□□□□ 0.25
LSM4Q9Y4Z0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSM4Q9Y4Z0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSM4Q9Y4Z0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSM4Q9Y4Z0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LSM4Q9Y4Z0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LSM4Q9Y4Z0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSM4Q9Y4Z0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LSM4Q9Y4Z0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.63■□□□□ 0.25
LSM4Q9Y4Z0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.63■□□□□ 0.25
LSM4Q9Y4Z0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LSM4Q9Y4Z0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSM4Q9Y4Z0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LSM4Q9Y4Z0 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.63■□□□□ 0.25
LSM4Q9Y4Z0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LSM4Q9Y4Z0 AL354811.1-201ENST00000610286 706 ntBASIC16.63■□□□□ 0.25
LSM4Q9Y4Z0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
LSM4Q9Y4Z0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.63■□□□□ 0.25
LSM4Q9Y4Z0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.63■□□□□ 0.25
LSM4Q9Y4Z0 AP005212.1-201ENST00000581547 1997 ntBASIC16.63■□□□□ 0.25
LSM4Q9Y4Z0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
LSM4Q9Y4Z0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
LSM4Q9Y4Z0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSM4Q9Y4Z0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSM4Q9Y4Z0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.63■□□□□ 0.25
LSM4Q9Y4Z0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.63■□□□□ 0.25
LSM4Q9Y4Z0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSM4Q9Y4Z0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.63■□□□□ 0.25
LSM4Q9Y4Z0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LSM4Q9Y4Z0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSM4Q9Y4Z0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSM4Q9Y4Z0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSM4Q9Y4Z0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.62■□□□□ 0.25
LSM4Q9Y4Z0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.62■□□□□ 0.25
LSM4Q9Y4Z0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LSM4Q9Y4Z0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSM4Q9Y4Z0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.62■□□□□ 0.25
LSM4Q9Y4Z0 AC012414.1-201ENST00000556676 535 ntBASIC16.62■□□□□ 0.25
LSM4Q9Y4Z0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LSM4Q9Y4Z0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.62■□□□□ 0.25
LSM4Q9Y4Z0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSM4Q9Y4Z0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LSM4Q9Y4Z0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LSM4Q9Y4Z0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.62■□□□□ 0.25
LSM4Q9Y4Z0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSM4Q9Y4Z0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSM4Q9Y4Z0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.62■□□□□ 0.25
LSM4Q9Y4Z0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC16.62■□□□□ 0.25
LSM4Q9Y4Z0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.61■□□□□ 0.25
LSM4Q9Y4Z0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.61■□□□□ 0.25
LSM4Q9Y4Z0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSM4Q9Y4Z0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSM4Q9Y4Z0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.61■□□□□ 0.25
LSM4Q9Y4Z0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
LSM4Q9Y4Z0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms