Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FNDC3AQ9Y2H6 KRT18P6-201ENST00000555540 1265 ntBASIC21.25■□□□□ 0.99
FNDC3AQ9Y2H6 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.25■□□□□ 0.99
FNDC3AQ9Y2H6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.25■□□□□ 0.99
FNDC3AQ9Y2H6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.25■□□□□ 0.99
FNDC3AQ9Y2H6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.25■□□□□ 0.99
FNDC3AQ9Y2H6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
FNDC3AQ9Y2H6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.25■□□□□ 0.99
FNDC3AQ9Y2H6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.25■□□□□ 0.99
FNDC3AQ9Y2H6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FNDC3AQ9Y2H6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FNDC3AQ9Y2H6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
FNDC3AQ9Y2H6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FNDC3AQ9Y2H6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
FNDC3AQ9Y2H6 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
FNDC3AQ9Y2H6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
FNDC3AQ9Y2H6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
FNDC3AQ9Y2H6 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
FNDC3AQ9Y2H6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
FNDC3AQ9Y2H6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.24■□□□□ 0.99
FNDC3AQ9Y2H6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FNDC3AQ9Y2H6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.24■□□□□ 0.99
FNDC3AQ9Y2H6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.24■□□□□ 0.99
FNDC3AQ9Y2H6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.24■□□□□ 0.99
FNDC3AQ9Y2H6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
FNDC3AQ9Y2H6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
FNDC3AQ9Y2H6 AC066615.1-201ENST00000640911 628 ntBASIC21.24■□□□□ 0.99
FNDC3AQ9Y2H6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
FNDC3AQ9Y2H6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
FNDC3AQ9Y2H6 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FNDC3AQ9Y2H6 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FNDC3AQ9Y2H6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
FNDC3AQ9Y2H6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
FNDC3AQ9Y2H6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FNDC3AQ9Y2H6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
FNDC3AQ9Y2H6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
FNDC3AQ9Y2H6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.23■□□□□ 0.99
FNDC3AQ9Y2H6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.23■□□□□ 0.99
FNDC3AQ9Y2H6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
FNDC3AQ9Y2H6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
FNDC3AQ9Y2H6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.23■□□□□ 0.99
FNDC3AQ9Y2H6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.23■□□□□ 0.99
FNDC3AQ9Y2H6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
FNDC3AQ9Y2H6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
FNDC3AQ9Y2H6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
FNDC3AQ9Y2H6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.22■□□□□ 0.99
FNDC3AQ9Y2H6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FNDC3AQ9Y2H6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.22■□□□□ 0.99
FNDC3AQ9Y2H6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.22■□□□□ 0.99
FNDC3AQ9Y2H6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
FNDC3AQ9Y2H6 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FNDC3AQ9Y2H6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FNDC3AQ9Y2H6 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.22■□□□□ 0.99
FNDC3AQ9Y2H6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.22■□□□□ 0.99
FNDC3AQ9Y2H6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
FNDC3AQ9Y2H6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.22■□□□□ 0.99
FNDC3AQ9Y2H6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.22■□□□□ 0.99
FNDC3AQ9Y2H6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.22■□□□□ 0.99
FNDC3AQ9Y2H6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.22■□□□□ 0.99
FNDC3AQ9Y2H6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.22■□□□□ 0.99
FNDC3AQ9Y2H6 MYCNOS-205ENST00000641950 531 ntBASIC21.22■□□□□ 0.99
FNDC3AQ9Y2H6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
FNDC3AQ9Y2H6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.22■□□□□ 0.99
FNDC3AQ9Y2H6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
FNDC3AQ9Y2H6 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
FNDC3AQ9Y2H6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FNDC3AQ9Y2H6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FNDC3AQ9Y2H6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
FNDC3AQ9Y2H6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.21■□□□□ 0.99
FNDC3AQ9Y2H6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
FNDC3AQ9Y2H6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FNDC3AQ9Y2H6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
FNDC3AQ9Y2H6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
FNDC3AQ9Y2H6 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.21■□□□□ 0.99
FNDC3AQ9Y2H6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
FNDC3AQ9Y2H6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
FNDC3AQ9Y2H6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
FNDC3AQ9Y2H6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.21■□□□□ 0.99
FNDC3AQ9Y2H6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.21■□□□□ 0.99
FNDC3AQ9Y2H6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
FNDC3AQ9Y2H6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.21■□□□□ 0.99
FNDC3AQ9Y2H6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.21■□□□□ 0.99
FNDC3AQ9Y2H6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.21■□□□□ 0.99
FNDC3AQ9Y2H6 AP001160.3-201ENST00000601484 763 ntBASIC21.21■□□□□ 0.99
FNDC3AQ9Y2H6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.21■□□□□ 0.99
FNDC3AQ9Y2H6 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FNDC3AQ9Y2H6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
FNDC3AQ9Y2H6 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
FNDC3AQ9Y2H6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
FNDC3AQ9Y2H6 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.21■□□□□ 0.99
FNDC3AQ9Y2H6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.21■□□□□ 0.99
FNDC3AQ9Y2H6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.2■□□□□ 0.99
FNDC3AQ9Y2H6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.99
FNDC3AQ9Y2H6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.2■□□□□ 0.99
FNDC3AQ9Y2H6 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
FNDC3AQ9Y2H6 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FNDC3AQ9Y2H6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FNDC3AQ9Y2H6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FNDC3AQ9Y2H6 SLC29A4P1-201ENST00000398760 971 ntBASIC21.2■□□□□ 0.98
FNDC3AQ9Y2H6 MIR4651-201ENST00000582622 73 ntBASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms