Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 STX5-203ENST00000394690 1568 ntTSL 5 BASIC27.38■■□□□ 1.97
SPG7Q9UQ90 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SPG7Q9UQ90 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SPG7Q9UQ90 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC27.37■■□□□ 1.97
SPG7Q9UQ90 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
SPG7Q9UQ90 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC27.37■■□□□ 1.97
SPG7Q9UQ90 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
SPG7Q9UQ90 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
SPG7Q9UQ90 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SPG7Q9UQ90 KRT18P68-201ENST00000392293 1000 ntBASIC27.37■■□□□ 1.97
SPG7Q9UQ90 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC27.37■■□□□ 1.97
SPG7Q9UQ90 AC007322.3-201ENST00000426526 701 ntBASIC27.37■■□□□ 1.97
SPG7Q9UQ90 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SPG7Q9UQ90 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC27.37■■□□□ 1.97
SPG7Q9UQ90 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SPG7Q9UQ90 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SPG7Q9UQ90 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SPG7Q9UQ90 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SPG7Q9UQ90 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SPG7Q9UQ90 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SPG7Q9UQ90 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SPG7Q9UQ90 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC27.36■■□□□ 1.97
SPG7Q9UQ90 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SPG7Q9UQ90 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SPG7Q9UQ90 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC27.36■■□□□ 1.97
SPG7Q9UQ90 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
SPG7Q9UQ90 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
SPG7Q9UQ90 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC27.36■■□□□ 1.97
SPG7Q9UQ90 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
SPG7Q9UQ90 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC27.36■■□□□ 1.97
SPG7Q9UQ90 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SPG7Q9UQ90 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC27.35■■□□□ 1.97
SPG7Q9UQ90 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SPG7Q9UQ90 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SPG7Q9UQ90 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SPG7Q9UQ90 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SPG7Q9UQ90 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SPG7Q9UQ90 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC27.35■■□□□ 1.97
SPG7Q9UQ90 PTPA-214ENST00000423100 988 ntTSL 2 BASIC27.35■■□□□ 1.97
SPG7Q9UQ90 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC27.35■■□□□ 1.97
SPG7Q9UQ90 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC27.35■■□□□ 1.97
SPG7Q9UQ90 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC27.35■■□□□ 1.97
SPG7Q9UQ90 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
SPG7Q9UQ90 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
SPG7Q9UQ90 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC27.35■■□□□ 1.97
SPG7Q9UQ90 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SPG7Q9UQ90 GCK-205ENST00000437084 1385 ntTSL 5 BASIC27.35■■□□□ 1.97
SPG7Q9UQ90 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SPG7Q9UQ90 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC27.34■■□□□ 1.97
SPG7Q9UQ90 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC27.34■■□□□ 1.97
SPG7Q9UQ90 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SPG7Q9UQ90 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
SPG7Q9UQ90 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
SPG7Q9UQ90 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC27.34■■□□□ 1.97
SPG7Q9UQ90 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SPG7Q9UQ90 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
SPG7Q9UQ90 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
SPG7Q9UQ90 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC27.33■■□□□ 1.97
SPG7Q9UQ90 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SPG7Q9UQ90 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SPG7Q9UQ90 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC27.33■■□□□ 1.97
SPG7Q9UQ90 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SPG7Q9UQ90 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC27.33■■□□□ 1.97
SPG7Q9UQ90 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC27.33■■□□□ 1.97
SPG7Q9UQ90 RPS2P4-201ENST00000476944 856 ntBASIC27.33■■□□□ 1.97
SPG7Q9UQ90 UNC93B4-201ENST00000505679 747 ntBASIC27.33■■□□□ 1.97
SPG7Q9UQ90 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
SPG7Q9UQ90 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
SPG7Q9UQ90 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
SPG7Q9UQ90 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SPG7Q9UQ90 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SPG7Q9UQ90 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC27.32■■□□□ 1.96
SPG7Q9UQ90 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SPG7Q9UQ90 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC27.32■■□□□ 1.96
SPG7Q9UQ90 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC27.32■■□□□ 1.96
SPG7Q9UQ90 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
SPG7Q9UQ90 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
SPG7Q9UQ90 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
SPG7Q9UQ90 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC27.31■■□□□ 1.96
SPG7Q9UQ90 PNMA6B-201ENST00000538162 1200 ntBASIC27.31■■□□□ 1.96
SPG7Q9UQ90 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SPG7Q9UQ90 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
SPG7Q9UQ90 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SPG7Q9UQ90 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC27.31■■□□□ 1.96
SPG7Q9UQ90 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SPG7Q9UQ90 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC27.3■■□□□ 1.96
SPG7Q9UQ90 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC27.3■■□□□ 1.96
SPG7Q9UQ90 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
SPG7Q9UQ90 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
SPG7Q9UQ90 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SPG7Q9UQ90 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SPG7Q9UQ90 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC27.3■■□□□ 1.96
SPG7Q9UQ90 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SPG7Q9UQ90 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC27.3■■□□□ 1.96
SPG7Q9UQ90 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC27.3■■□□□ 1.96
SPG7Q9UQ90 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC27.3■■□□□ 1.96
SPG7Q9UQ90 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC27.3■■□□□ 1.96
SPG7Q9UQ90 ARL16-209ENST00000573715 763 ntTSL 3 BASIC27.3■■□□□ 1.96
SPG7Q9UQ90 ARL16-211ENST00000576135 694 ntTSL 3 BASIC27.3■■□□□ 1.96
SPG7Q9UQ90 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC27.3■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms