Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SATB2Q9UPW6 PRORSD1P-201ENST00000295112 541 ntBASIC20.32■□□□□ 0.84
SATB2Q9UPW6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SATB2Q9UPW6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.32■□□□□ 0.84
SATB2Q9UPW6 AC093787.1-201ENST00000450396 207 ntBASIC20.32■□□□□ 0.84
SATB2Q9UPW6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SATB2Q9UPW6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.32■□□□□ 0.84
SATB2Q9UPW6 AL034346.1-201ENST00000568244 1277 ntBASIC20.32■□□□□ 0.84
SATB2Q9UPW6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.32■□□□□ 0.84
SATB2Q9UPW6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
SATB2Q9UPW6 AC069236.1-201ENST00000604339 616 ntBASIC20.32■□□□□ 0.84
SATB2Q9UPW6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SATB2Q9UPW6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SATB2Q9UPW6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SATB2Q9UPW6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SATB2Q9UPW6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SATB2Q9UPW6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SATB2Q9UPW6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.32■□□□□ 0.84
SATB2Q9UPW6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.32■□□□□ 0.84
SATB2Q9UPW6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SATB2Q9UPW6 AC139530.1-201ENST00000575312 1977 ntBASIC20.32■□□□□ 0.84
SATB2Q9UPW6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
SATB2Q9UPW6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SATB2Q9UPW6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.31■□□□□ 0.84
SATB2Q9UPW6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SATB2Q9UPW6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SATB2Q9UPW6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SATB2Q9UPW6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.31■□□□□ 0.84
SATB2Q9UPW6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SATB2Q9UPW6 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
SATB2Q9UPW6 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SATB2Q9UPW6 AC053503.5-201ENST00000601508 636 ntBASIC20.31■□□□□ 0.84
SATB2Q9UPW6 AC016405.3-201ENST00000607710 860 ntBASIC20.31■□□□□ 0.84
SATB2Q9UPW6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SATB2Q9UPW6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SATB2Q9UPW6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SATB2Q9UPW6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SATB2Q9UPW6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SATB2Q9UPW6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.3■□□□□ 0.84
SATB2Q9UPW6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SATB2Q9UPW6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.3■□□□□ 0.84
SATB2Q9UPW6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SATB2Q9UPW6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SATB2Q9UPW6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
SATB2Q9UPW6 EP400NL-214ENST00000641289 2402 ntBASIC20.3■□□□□ 0.84
SATB2Q9UPW6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SATB2Q9UPW6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.3■□□□□ 0.84
SATB2Q9UPW6 AC092118.2-201ENST00000613495 667 ntBASIC20.3■□□□□ 0.84
SATB2Q9UPW6 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.3■□□□□ 0.84
SATB2Q9UPW6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SATB2Q9UPW6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SATB2Q9UPW6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SATB2Q9UPW6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SATB2Q9UPW6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SATB2Q9UPW6 AC080038.3-201ENST00000623346 1952 ntBASIC20.3■□□□□ 0.84
SATB2Q9UPW6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SATB2Q9UPW6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
SATB2Q9UPW6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SATB2Q9UPW6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SATB2Q9UPW6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.29■□□□□ 0.84
SATB2Q9UPW6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SATB2Q9UPW6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SATB2Q9UPW6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.29■□□□□ 0.84
SATB2Q9UPW6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SATB2Q9UPW6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.29■□□□□ 0.84
SATB2Q9UPW6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SATB2Q9UPW6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.29■□□□□ 0.84
SATB2Q9UPW6 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
SATB2Q9UPW6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SATB2Q9UPW6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.29■□□□□ 0.84
SATB2Q9UPW6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.29■□□□□ 0.84
SATB2Q9UPW6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SATB2Q9UPW6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.29■□□□□ 0.84
SATB2Q9UPW6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SATB2Q9UPW6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.29■□□□□ 0.84
SATB2Q9UPW6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SATB2Q9UPW6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.29■□□□□ 0.84
SATB2Q9UPW6 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SATB2Q9UPW6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SATB2Q9UPW6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SATB2Q9UPW6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.28■□□□□ 0.84
SATB2Q9UPW6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SATB2Q9UPW6 AP006587.3-201ENST00000525742 1516 ntBASIC20.28■□□□□ 0.84
SATB2Q9UPW6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SATB2Q9UPW6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SATB2Q9UPW6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SATB2Q9UPW6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SATB2Q9UPW6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SATB2Q9UPW6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SATB2Q9UPW6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SATB2Q9UPW6 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SATB2Q9UPW6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
SATB2Q9UPW6 BX276092.2-201ENST00000417668 665 ntBASIC20.28■□□□□ 0.84
SATB2Q9UPW6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.28■□□□□ 0.84
SATB2Q9UPW6 RARRES2P4-201ENST00000514074 484 ntBASIC20.28■□□□□ 0.84
SATB2Q9UPW6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.28■□□□□ 0.84
SATB2Q9UPW6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.28■□□□□ 0.84
SATB2Q9UPW6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.28■□□□□ 0.84
SATB2Q9UPW6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.28■□□□□ 0.84
SATB2Q9UPW6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms