Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.6■□□□□ 0.41
RNF7Q9UBF6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RNF7Q9UBF6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.6■□□□□ 0.41
RNF7Q9UBF6 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF7Q9UBF6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF7Q9UBF6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF7Q9UBF6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
RNF7Q9UBF6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF7Q9UBF6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF7Q9UBF6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
RNF7Q9UBF6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF7Q9UBF6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF7Q9UBF6 AC245052.3-201ENST00000450182 901 ntBASIC17.59■□□□□ 0.41
RNF7Q9UBF6 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF7Q9UBF6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
RNF7Q9UBF6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.59■□□□□ 0.41
RNF7Q9UBF6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF7Q9UBF6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.59■□□□□ 0.41
RNF7Q9UBF6 AC092666.2-201ENST00000613287 246 ntBASIC17.59■□□□□ 0.41
RNF7Q9UBF6 BID-214ENST00000617586 542 ntTSL 5 BASIC17.59■□□□□ 0.41
RNF7Q9UBF6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF7Q9UBF6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF7Q9UBF6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF7Q9UBF6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF7Q9UBF6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RNF7Q9UBF6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF7Q9UBF6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF7Q9UBF6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF7Q9UBF6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF7Q9UBF6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF7Q9UBF6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF7Q9UBF6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF7Q9UBF6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF7Q9UBF6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
RNF7Q9UBF6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RNF7Q9UBF6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RNF7Q9UBF6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RNF7Q9UBF6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF7Q9UBF6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF7Q9UBF6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF7Q9UBF6 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RNF7Q9UBF6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF7Q9UBF6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF7Q9UBF6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF7Q9UBF6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.57■□□□□ 0.4
RNF7Q9UBF6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF7Q9UBF6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.57■□□□□ 0.4
RNF7Q9UBF6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF7Q9UBF6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RNF7Q9UBF6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF7Q9UBF6 AC011767.1-201ENST00000617410 1153 ntBASIC17.57■□□□□ 0.4
RNF7Q9UBF6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF7Q9UBF6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF7Q9UBF6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF7Q9UBF6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF7Q9UBF6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF7Q9UBF6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF7Q9UBF6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF7Q9UBF6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF7Q9UBF6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF7Q9UBF6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RNF7Q9UBF6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF7Q9UBF6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF7Q9UBF6 AC004911.1-201ENST00000416316 871 ntBASIC17.56■□□□□ 0.4
RNF7Q9UBF6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF7Q9UBF6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF7Q9UBF6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF7Q9UBF6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF7Q9UBF6 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.56■□□□□ 0.4
RNF7Q9UBF6 AC010536.3-201ENST00000620306 533 ntBASIC17.56■□□□□ 0.4
RNF7Q9UBF6 AC092437.1-201ENST00000624794 1048 ntBASIC17.56■□□□□ 0.4
RNF7Q9UBF6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.56■□□□□ 0.4
RNF7Q9UBF6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF7Q9UBF6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF7Q9UBF6 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF7Q9UBF6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF7Q9UBF6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF7Q9UBF6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF7Q9UBF6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF7Q9UBF6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF7Q9UBF6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF7Q9UBF6 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RNF7Q9UBF6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF7Q9UBF6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF7Q9UBF6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF7Q9UBF6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF7Q9UBF6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF7Q9UBF6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF7Q9UBF6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF7Q9UBF6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF7Q9UBF6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF7Q9UBF6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.55■□□□□ 0.4
RNF7Q9UBF6 MFSD11-216ENST00000590393 1141 ntBASIC17.55■□□□□ 0.4
RNF7Q9UBF6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RNF7Q9UBF6 AC243732.1-201ENST00000612648 864 ntBASIC17.55■□□□□ 0.4
RNF7Q9UBF6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.55■□□□□ 0.4
RNF7Q9UBF6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF7Q9UBF6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF7Q9UBF6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF7Q9UBF6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms