Protein–RNA interactions for Protein: Q9NYL5

CYP39A1, 24-hydroxycholesterol 7-alpha-hydroxylase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP39A1Q9NYL5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
CYP39A1Q9NYL5 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.77■■□□□ 1.4
CYP39A1Q9NYL5 AC100791.3-201ENST00000617619 330 ntBASIC23.77■■□□□ 1.4
CYP39A1Q9NYL5 AC066615.1-201ENST00000640911 628 ntBASIC23.77■■□□□ 1.4
CYP39A1Q9NYL5 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.77■■□□□ 1.4
CYP39A1Q9NYL5 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CYP39A1Q9NYL5 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CYP39A1Q9NYL5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CYP39A1Q9NYL5 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CYP39A1Q9NYL5 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.77■■□□□ 1.4
CYP39A1Q9NYL5 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CYP39A1Q9NYL5 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CYP39A1Q9NYL5 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CYP39A1Q9NYL5 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CYP39A1Q9NYL5 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CYP39A1Q9NYL5 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CYP39A1Q9NYL5 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CYP39A1Q9NYL5 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CYP39A1Q9NYL5 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CYP39A1Q9NYL5 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
CYP39A1Q9NYL5 LSM12P1-201ENST00000411836 588 ntBASIC23.76■■□□□ 1.39
CYP39A1Q9NYL5 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.76■■□□□ 1.39
CYP39A1Q9NYL5 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23.76■■□□□ 1.39
CYP39A1Q9NYL5 ITM2C-210ENST00000620962 501 ntBASIC23.76■■□□□ 1.39
CYP39A1Q9NYL5 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
CYP39A1Q9NYL5 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CYP39A1Q9NYL5 GUSBP5-202ENST00000510805 1989 ntBASIC23.76■■□□□ 1.39
CYP39A1Q9NYL5 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CYP39A1Q9NYL5 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CYP39A1Q9NYL5 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC23.75■■□□□ 1.39
CYP39A1Q9NYL5 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC23.75■■□□□ 1.39
CYP39A1Q9NYL5 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC23.75■■□□□ 1.39
CYP39A1Q9NYL5 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC23.75■■□□□ 1.39
CYP39A1Q9NYL5 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC23.75■■□□□ 1.39
CYP39A1Q9NYL5 CYP2T3P-201ENST00000601990 817 ntBASIC23.75■■□□□ 1.39
CYP39A1Q9NYL5 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CYP39A1Q9NYL5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CYP39A1Q9NYL5 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.75■■□□□ 1.39
CYP39A1Q9NYL5 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CYP39A1Q9NYL5 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.74■■□□□ 1.39
CYP39A1Q9NYL5 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CYP39A1Q9NYL5 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CYP39A1Q9NYL5 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CYP39A1Q9NYL5 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CYP39A1Q9NYL5 SERPINH1P1-201ENST00000419794 1249 ntBASIC23.74■■□□□ 1.39
CYP39A1Q9NYL5 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.74■■□□□ 1.39
CYP39A1Q9NYL5 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.74■■□□□ 1.39
CYP39A1Q9NYL5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC23.74■■□□□ 1.39
CYP39A1Q9NYL5 AC008687.6-201ENST00000596318 630 ntBASIC23.74■■□□□ 1.39
CYP39A1Q9NYL5 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC23.74■■□□□ 1.39
CYP39A1Q9NYL5 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CYP39A1Q9NYL5 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CYP39A1Q9NYL5 AC233723.2-201ENST00000623798 2106 ntBASIC23.74■■□□□ 1.39
CYP39A1Q9NYL5 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CYP39A1Q9NYL5 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CYP39A1Q9NYL5 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CYP39A1Q9NYL5 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23.73■■□□□ 1.39
CYP39A1Q9NYL5 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23.73■■□□□ 1.39
CYP39A1Q9NYL5 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CYP39A1Q9NYL5 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.73■■□□□ 1.39
CYP39A1Q9NYL5 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CYP39A1Q9NYL5 SAPCD2P1-201ENST00000395413 1184 ntBASIC23.73■■□□□ 1.39
CYP39A1Q9NYL5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.73■■□□□ 1.39
CYP39A1Q9NYL5 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CYP39A1Q9NYL5 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
CYP39A1Q9NYL5 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CYP39A1Q9NYL5 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CYP39A1Q9NYL5 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CYP39A1Q9NYL5 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CYP39A1Q9NYL5 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC23.72■■□□□ 1.39
CYP39A1Q9NYL5 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CYP39A1Q9NYL5 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC23.72■■□□□ 1.39
CYP39A1Q9NYL5 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CYP39A1Q9NYL5 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.72■■□□□ 1.39
CYP39A1Q9NYL5 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC23.72■■□□□ 1.39
CYP39A1Q9NYL5 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.72■■□□□ 1.39
CYP39A1Q9NYL5 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CYP39A1Q9NYL5 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
CYP39A1Q9NYL5 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.72■■□□□ 1.39
CYP39A1Q9NYL5 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.72■■□□□ 1.39
CYP39A1Q9NYL5 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CYP39A1Q9NYL5 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CYP39A1Q9NYL5 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.71■■□□□ 1.39
CYP39A1Q9NYL5 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.71■■□□□ 1.39
CYP39A1Q9NYL5 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CYP39A1Q9NYL5 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CYP39A1Q9NYL5 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CYP39A1Q9NYL5 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CYP39A1Q9NYL5 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC23.71■■□□□ 1.39
CYP39A1Q9NYL5 KRT18P29-201ENST00000397031 1267 ntBASIC23.71■■□□□ 1.39
CYP39A1Q9NYL5 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC23.71■■□□□ 1.39
CYP39A1Q9NYL5 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC23.71■■□□□ 1.39
CYP39A1Q9NYL5 INO80E-214ENST00000620599 515 ntTSL 2 BASIC23.71■■□□□ 1.39
CYP39A1Q9NYL5 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CYP39A1Q9NYL5 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC23.7■■□□□ 1.39
CYP39A1Q9NYL5 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CYP39A1Q9NYL5 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.7■■□□□ 1.39
CYP39A1Q9NYL5 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CYP39A1Q9NYL5 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
CYP39A1Q9NYL5 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms