Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NDE1Q9NXR1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
NDE1Q9NXR1 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NDE1Q9NXR1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
NDE1Q9NXR1 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
NDE1Q9NXR1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
NDE1Q9NXR1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NDE1Q9NXR1 Z92544.1-202ENST00000571933 1220 ntBASIC20.13■□□□□ 0.81
NDE1Q9NXR1 AL451085.2-201ENST00000605085 799 ntBASIC20.13■□□□□ 0.81
NDE1Q9NXR1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NDE1Q9NXR1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
NDE1Q9NXR1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NDE1Q9NXR1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NDE1Q9NXR1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.13■□□□□ 0.81
NDE1Q9NXR1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.13■□□□□ 0.81
NDE1Q9NXR1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
NDE1Q9NXR1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NDE1Q9NXR1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NDE1Q9NXR1 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
NDE1Q9NXR1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.12■□□□□ 0.81
NDE1Q9NXR1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NDE1Q9NXR1 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
NDE1Q9NXR1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
NDE1Q9NXR1 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NDE1Q9NXR1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NDE1Q9NXR1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.12■□□□□ 0.81
NDE1Q9NXR1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NDE1Q9NXR1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NDE1Q9NXR1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.12■□□□□ 0.81
NDE1Q9NXR1 MTDHP2-201ENST00000601468 714 ntBASIC20.12■□□□□ 0.81
NDE1Q9NXR1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NDE1Q9NXR1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NDE1Q9NXR1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NDE1Q9NXR1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NDE1Q9NXR1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NDE1Q9NXR1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.12■□□□□ 0.81
NDE1Q9NXR1 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NDE1Q9NXR1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NDE1Q9NXR1 PLK5-205ENST00000642079 1969 ntBASIC20.12■□□□□ 0.81
NDE1Q9NXR1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NDE1Q9NXR1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NDE1Q9NXR1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NDE1Q9NXR1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NDE1Q9NXR1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
NDE1Q9NXR1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NDE1Q9NXR1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.11■□□□□ 0.81
NDE1Q9NXR1 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NDE1Q9NXR1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NDE1Q9NXR1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NDE1Q9NXR1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NDE1Q9NXR1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NDE1Q9NXR1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.11■□□□□ 0.81
NDE1Q9NXR1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.11■□□□□ 0.81
NDE1Q9NXR1 AC092028.1-203ENST00000608262 953 ntBASIC20.11■□□□□ 0.81
NDE1Q9NXR1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NDE1Q9NXR1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
NDE1Q9NXR1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.11■□□□□ 0.81
NDE1Q9NXR1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NDE1Q9NXR1 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.11■□□□□ 0.81
NDE1Q9NXR1 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
NDE1Q9NXR1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
NDE1Q9NXR1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NDE1Q9NXR1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NDE1Q9NXR1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.1■□□□□ 0.81
NDE1Q9NXR1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.1■□□□□ 0.81
NDE1Q9NXR1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NDE1Q9NXR1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NDE1Q9NXR1 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NDE1Q9NXR1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.1■□□□□ 0.81
NDE1Q9NXR1 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.1■□□□□ 0.81
NDE1Q9NXR1 AC010141.3-201ENST00000456659 717 ntBASIC20.1■□□□□ 0.81
NDE1Q9NXR1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.1■□□□□ 0.81
NDE1Q9NXR1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
NDE1Q9NXR1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
NDE1Q9NXR1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.1■□□□□ 0.81
NDE1Q9NXR1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.09■□□□□ 0.81
NDE1Q9NXR1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
NDE1Q9NXR1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NDE1Q9NXR1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.09■□□□□ 0.81
NDE1Q9NXR1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.09■□□□□ 0.81
NDE1Q9NXR1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
NDE1Q9NXR1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.09■□□□□ 0.81
NDE1Q9NXR1 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.09■□□□□ 0.81
NDE1Q9NXR1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
NDE1Q9NXR1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NDE1Q9NXR1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.09■□□□□ 0.81
NDE1Q9NXR1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NDE1Q9NXR1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.09■□□□□ 0.81
NDE1Q9NXR1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.09■□□□□ 0.81
NDE1Q9NXR1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
NDE1Q9NXR1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NDE1Q9NXR1 SMG8-203ENST00000578922 2178 ntBASIC20.08■□□□□ 0.81
NDE1Q9NXR1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NDE1Q9NXR1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NDE1Q9NXR1 AC020907.5-201ENST00000624372 1936 ntBASIC20.08■□□□□ 0.81
NDE1Q9NXR1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
NDE1Q9NXR1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.08■□□□□ 0.81
NDE1Q9NXR1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NDE1Q9NXR1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NDE1Q9NXR1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms