Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.27■□□□□ 0.36
LIN7CQ9NUP9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LIN7CQ9NUP9 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LIN7CQ9NUP9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.27■□□□□ 0.36
LIN7CQ9NUP9 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LIN7CQ9NUP9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.27■□□□□ 0.36
LIN7CQ9NUP9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.27■□□□□ 0.36
LIN7CQ9NUP9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.27■□□□□ 0.36
LIN7CQ9NUP9 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LIN7CQ9NUP9 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
LIN7CQ9NUP9 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LIN7CQ9NUP9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LIN7CQ9NUP9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LIN7CQ9NUP9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.27■□□□□ 0.35
LIN7CQ9NUP9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LIN7CQ9NUP9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.27■□□□□ 0.35
LIN7CQ9NUP9 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LIN7CQ9NUP9 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LIN7CQ9NUP9 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LIN7CQ9NUP9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.26■□□□□ 0.35
LIN7CQ9NUP9 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.26■□□□□ 0.35
LIN7CQ9NUP9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.26■□□□□ 0.35
LIN7CQ9NUP9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LIN7CQ9NUP9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.26■□□□□ 0.35
LIN7CQ9NUP9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LIN7CQ9NUP9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.26■□□□□ 0.35
LIN7CQ9NUP9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LIN7CQ9NUP9 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LIN7CQ9NUP9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
LIN7CQ9NUP9 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LIN7CQ9NUP9 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LIN7CQ9NUP9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.26■□□□□ 0.35
LIN7CQ9NUP9 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LIN7CQ9NUP9 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.26■□□□□ 0.35
LIN7CQ9NUP9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
LIN7CQ9NUP9 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.26■□□□□ 0.35
LIN7CQ9NUP9 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LIN7CQ9NUP9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LIN7CQ9NUP9 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LIN7CQ9NUP9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LIN7CQ9NUP9 LINC01006-201ENST00000333319 2292 ntBASIC17.26■□□□□ 0.35
LIN7CQ9NUP9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.26■□□□□ 0.35
LIN7CQ9NUP9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.25■□□□□ 0.35
LIN7CQ9NUP9 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIN7CQ9NUP9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIN7CQ9NUP9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.25■□□□□ 0.35
LIN7CQ9NUP9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LIN7CQ9NUP9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIN7CQ9NUP9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.25■□□□□ 0.35
LIN7CQ9NUP9 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIN7CQ9NUP9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIN7CQ9NUP9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.25■□□□□ 0.35
LIN7CQ9NUP9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIN7CQ9NUP9 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.25■□□□□ 0.35
LIN7CQ9NUP9 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.25■□□□□ 0.35
LIN7CQ9NUP9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
LIN7CQ9NUP9 FEM1AP1-201ENST00000431297 1995 ntBASIC17.25■□□□□ 0.35
LIN7CQ9NUP9 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIN7CQ9NUP9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LIN7CQ9NUP9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
LIN7CQ9NUP9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LIN7CQ9NUP9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LIN7CQ9NUP9 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
LIN7CQ9NUP9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.25■□□□□ 0.35
LIN7CQ9NUP9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.25■□□□□ 0.35
LIN7CQ9NUP9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.24■□□□□ 0.35
LIN7CQ9NUP9 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LIN7CQ9NUP9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LIN7CQ9NUP9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LIN7CQ9NUP9 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LIN7CQ9NUP9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
LIN7CQ9NUP9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LIN7CQ9NUP9 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LIN7CQ9NUP9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LIN7CQ9NUP9 ZNRF2P3-201ENST00000424200 374 ntBASIC17.24■□□□□ 0.35
LIN7CQ9NUP9 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.24■□□□□ 0.35
LIN7CQ9NUP9 AL354811.1-201ENST00000610286 706 ntBASIC17.24■□□□□ 0.35
LIN7CQ9NUP9 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.24■□□□□ 0.35
LIN7CQ9NUP9 AL358852.1-201ENST00000623174 1268 ntBASIC17.24■□□□□ 0.35
LIN7CQ9NUP9 AC105233.4-201ENST00000642045 216 ntBASIC17.24■□□□□ 0.35
LIN7CQ9NUP9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LIN7CQ9NUP9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
LIN7CQ9NUP9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.24■□□□□ 0.35
LIN7CQ9NUP9 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.24■□□□□ 0.35
LIN7CQ9NUP9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.24■□□□□ 0.35
LIN7CQ9NUP9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LIN7CQ9NUP9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.24■□□□□ 0.35
LIN7CQ9NUP9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LIN7CQ9NUP9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.23■□□□□ 0.35
LIN7CQ9NUP9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LIN7CQ9NUP9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LIN7CQ9NUP9 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LIN7CQ9NUP9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LIN7CQ9NUP9 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LIN7CQ9NUP9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LIN7CQ9NUP9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
LIN7CQ9NUP9 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LIN7CQ9NUP9 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LIN7CQ9NUP9 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.23■□□□□ 0.35
LIN7CQ9NUP9 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms