Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
GDF3Q9NR23 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.96■■□□□ 1.11
GDF3Q9NR23 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.96■■□□□ 1.11
GDF3Q9NR23 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.96■■□□□ 1.11
GDF3Q9NR23 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
GDF3Q9NR23 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
GDF3Q9NR23 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.96■■□□□ 1.11
GDF3Q9NR23 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
GDF3Q9NR23 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.96■■□□□ 1.11
GDF3Q9NR23 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.96■■□□□ 1.11
GDF3Q9NR23 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
GDF3Q9NR23 AC010525.1-201ENST00000585559 441 ntBASIC21.96■■□□□ 1.11
GDF3Q9NR23 IKBKGP1-201ENST00000612193 1073 ntBASIC21.96■■□□□ 1.11
GDF3Q9NR23 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
GDF3Q9NR23 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
GDF3Q9NR23 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
GDF3Q9NR23 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
GDF3Q9NR23 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
GDF3Q9NR23 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.96■■□□□ 1.11
GDF3Q9NR23 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
GDF3Q9NR23 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.95■■□□□ 1.11
GDF3Q9NR23 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
GDF3Q9NR23 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.95■■□□□ 1.1
GDF3Q9NR23 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
GDF3Q9NR23 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.95■■□□□ 1.1
GDF3Q9NR23 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.95■■□□□ 1.1
GDF3Q9NR23 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
GDF3Q9NR23 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.95■■□□□ 1.1
GDF3Q9NR23 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
GDF3Q9NR23 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.95■■□□□ 1.1
GDF3Q9NR23 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.95■■□□□ 1.1
GDF3Q9NR23 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.95■■□□□ 1.1
GDF3Q9NR23 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
GDF3Q9NR23 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.95■■□□□ 1.1
GDF3Q9NR23 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
GDF3Q9NR23 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.95■■□□□ 1.1
GDF3Q9NR23 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
GDF3Q9NR23 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
GDF3Q9NR23 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GDF3Q9NR23 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
GDF3Q9NR23 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
GDF3Q9NR23 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
GDF3Q9NR23 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
GDF3Q9NR23 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
GDF3Q9NR23 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
GDF3Q9NR23 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.94■■□□□ 1.1
GDF3Q9NR23 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.94■■□□□ 1.1
GDF3Q9NR23 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
GDF3Q9NR23 RARRES2P11-201ENST00000635158 484 ntBASIC21.94■■□□□ 1.1
GDF3Q9NR23 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.94■■□□□ 1.1
GDF3Q9NR23 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
GDF3Q9NR23 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.94■■□□□ 1.1
GDF3Q9NR23 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.94■■□□□ 1.1
GDF3Q9NR23 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.94■■□□□ 1.1
GDF3Q9NR23 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GDF3Q9NR23 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
GDF3Q9NR23 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
GDF3Q9NR23 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.93■■□□□ 1.1
GDF3Q9NR23 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.93■■□□□ 1.1
GDF3Q9NR23 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
GDF3Q9NR23 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
GDF3Q9NR23 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
GDF3Q9NR23 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.93■■□□□ 1.1
GDF3Q9NR23 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
GDF3Q9NR23 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.93■■□□□ 1.1
GDF3Q9NR23 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
GDF3Q9NR23 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
GDF3Q9NR23 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
GDF3Q9NR23 AC090192.1-201ENST00000517740 490 ntBASIC21.93■■□□□ 1.1
GDF3Q9NR23 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
GDF3Q9NR23 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
GDF3Q9NR23 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
GDF3Q9NR23 AC006128.1-201ENST00000624704 1661 ntBASIC21.93■■□□□ 1.1
GDF3Q9NR23 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.93■■□□□ 1.1
GDF3Q9NR23 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
GDF3Q9NR23 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GDF3Q9NR23 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
GDF3Q9NR23 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
GDF3Q9NR23 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GDF3Q9NR23 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
GDF3Q9NR23 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GDF3Q9NR23 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
GDF3Q9NR23 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GDF3Q9NR23 AP005435.1-201ENST00000529293 1178 ntBASIC21.92■■□□□ 1.1
GDF3Q9NR23 CCDC92B-201ENST00000575506 885 ntBASIC21.92■■□□□ 1.1
GDF3Q9NR23 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
GDF3Q9NR23 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GDF3Q9NR23 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
GDF3Q9NR23 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.92■■□□□ 1.1
GDF3Q9NR23 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
GDF3Q9NR23 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.92■■□□□ 1.1
GDF3Q9NR23 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
GDF3Q9NR23 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
GDF3Q9NR23 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
GDF3Q9NR23 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.92■■□□□ 1.1
GDF3Q9NR23 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
GDF3Q9NR23 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
GDF3Q9NR23 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GDF3Q9NR23 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
GDF3Q9NR23 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms