Protein–RNA interactions for Protein: Q9NPA2

MMP25, Matrix metalloproteinase-25, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP25Q9NPA2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MMP25Q9NPA2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.42■□□□□ 0.7
MMP25Q9NPA2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
MMP25Q9NPA2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.42■□□□□ 0.7
MMP25Q9NPA2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MMP25Q9NPA2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MMP25Q9NPA2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.42■□□□□ 0.7
MMP25Q9NPA2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.42■□□□□ 0.7
MMP25Q9NPA2 AL162412.1-201ENST00000567129 965 ntBASIC19.42■□□□□ 0.7
MMP25Q9NPA2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.42■□□□□ 0.7
MMP25Q9NPA2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MMP25Q9NPA2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.42■□□□□ 0.7
MMP25Q9NPA2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.42■□□□□ 0.7
MMP25Q9NPA2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MMP25Q9NPA2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MMP25Q9NPA2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MMP25Q9NPA2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.41■□□□□ 0.7
MMP25Q9NPA2 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MMP25Q9NPA2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MMP25Q9NPA2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.41■□□□□ 0.7
MMP25Q9NPA2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
MMP25Q9NPA2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
MMP25Q9NPA2 AL355802.2-201ENST00000402069 882 ntBASIC19.41■□□□□ 0.7
MMP25Q9NPA2 GUSBP6-202ENST00000438529 1198 ntBASIC19.41■□□□□ 0.7
MMP25Q9NPA2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
MMP25Q9NPA2 AL591742.1-201ENST00000604433 565 ntBASIC19.41■□□□□ 0.7
MMP25Q9NPA2 OR10C1-204ENST00000622521 1039 ntBASIC19.41■□□□□ 0.7
MMP25Q9NPA2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MMP25Q9NPA2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.41■□□□□ 0.7
MMP25Q9NPA2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MMP25Q9NPA2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.4■□□□□ 0.7
MMP25Q9NPA2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
MMP25Q9NPA2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.4■□□□□ 0.7
MMP25Q9NPA2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.4■□□□□ 0.7
MMP25Q9NPA2 AC244015.2-201ENST00000616358 1861 ntBASIC19.4■□□□□ 0.7
MMP25Q9NPA2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.4■□□□□ 0.7
MMP25Q9NPA2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MMP25Q9NPA2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
MMP25Q9NPA2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.4■□□□□ 0.7
MMP25Q9NPA2 AC105036.2-201ENST00000569468 176 ntBASIC19.4■□□□□ 0.7
MMP25Q9NPA2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
MMP25Q9NPA2 AC069236.1-201ENST00000604339 616 ntBASIC19.4■□□□□ 0.7
MMP25Q9NPA2 AC008694.1-202ENST00000636953 945 ntBASIC19.4■□□□□ 0.7
MMP25Q9NPA2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MMP25Q9NPA2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
MMP25Q9NPA2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MMP25Q9NPA2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
MMP25Q9NPA2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
MMP25Q9NPA2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
MMP25Q9NPA2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.39■□□□□ 0.7
MMP25Q9NPA2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MMP25Q9NPA2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MMP25Q9NPA2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MMP25Q9NPA2 SLC29A4P1-201ENST00000398760 971 ntBASIC19.39■□□□□ 0.69
MMP25Q9NPA2 AC245052.3-201ENST00000450182 901 ntBASIC19.39■□□□□ 0.69
MMP25Q9NPA2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.39■□□□□ 0.69
MMP25Q9NPA2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
MMP25Q9NPA2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.39■□□□□ 0.69
MMP25Q9NPA2 AC142086.2-201ENST00000569753 217 ntBASIC19.39■□□□□ 0.69
MMP25Q9NPA2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MMP25Q9NPA2 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
MMP25Q9NPA2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.39■□□□□ 0.69
MMP25Q9NPA2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.39■□□□□ 0.69
MMP25Q9NPA2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.39■□□□□ 0.69
MMP25Q9NPA2 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MMP25Q9NPA2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MMP25Q9NPA2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MMP25Q9NPA2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MMP25Q9NPA2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
MMP25Q9NPA2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MMP25Q9NPA2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.39■□□□□ 0.69
MMP25Q9NPA2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
MMP25Q9NPA2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP25Q9NPA2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP25Q9NPA2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP25Q9NPA2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MMP25Q9NPA2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.38■□□□□ 0.69
MMP25Q9NPA2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP25Q9NPA2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
MMP25Q9NPA2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.38■□□□□ 0.69
MMP25Q9NPA2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP25Q9NPA2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.38■□□□□ 0.69
MMP25Q9NPA2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MMP25Q9NPA2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
MMP25Q9NPA2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP25Q9NPA2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.37■□□□□ 0.69
MMP25Q9NPA2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MMP25Q9NPA2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP25Q9NPA2 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MMP25Q9NPA2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP25Q9NPA2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.37■□□□□ 0.69
MMP25Q9NPA2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.37■□□□□ 0.69
MMP25Q9NPA2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
MMP25Q9NPA2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP25Q9NPA2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP25Q9NPA2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
MMP25Q9NPA2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP25Q9NPA2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP25Q9NPA2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MMP25Q9NPA2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms