Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.78■□□□□ 0.44
GCM1Q9NP62 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
GCM1Q9NP62 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.78■□□□□ 0.44
GCM1Q9NP62 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.78■□□□□ 0.44
GCM1Q9NP62 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GCM1Q9NP62 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
GCM1Q9NP62 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GCM1Q9NP62 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GCM1Q9NP62 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.78■□□□□ 0.44
GCM1Q9NP62 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GCM1Q9NP62 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GCM1Q9NP62 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
GCM1Q9NP62 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GCM1Q9NP62 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GCM1Q9NP62 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.77■□□□□ 0.44
GCM1Q9NP62 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GCM1Q9NP62 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
GCM1Q9NP62 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GCM1Q9NP62 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GCM1Q9NP62 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
GCM1Q9NP62 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GCM1Q9NP62 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GCM1Q9NP62 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.77■□□□□ 0.44
GCM1Q9NP62 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GCM1Q9NP62 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
GCM1Q9NP62 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.77■□□□□ 0.44
GCM1Q9NP62 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GCM1Q9NP62 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.77■□□□□ 0.44
GCM1Q9NP62 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GCM1Q9NP62 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GCM1Q9NP62 AC061975.6-201ENST00000579045 1553 ntBASIC17.77■□□□□ 0.44
GCM1Q9NP62 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
GCM1Q9NP62 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
GCM1Q9NP62 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GCM1Q9NP62 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GCM1Q9NP62 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
GCM1Q9NP62 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
GCM1Q9NP62 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
GCM1Q9NP62 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GCM1Q9NP62 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GCM1Q9NP62 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.76■□□□□ 0.43
GCM1Q9NP62 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
GCM1Q9NP62 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GCM1Q9NP62 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GCM1Q9NP62 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
GCM1Q9NP62 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GCM1Q9NP62 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.76■□□□□ 0.43
GCM1Q9NP62 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
GCM1Q9NP62 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.76■□□□□ 0.43
GCM1Q9NP62 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
GCM1Q9NP62 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.76■□□□□ 0.43
GCM1Q9NP62 SLC7A5P2-201ENST00000553010 536 ntBASIC17.76■□□□□ 0.43
GCM1Q9NP62 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GCM1Q9NP62 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.76■□□□□ 0.43
GCM1Q9NP62 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GCM1Q9NP62 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
GCM1Q9NP62 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
GCM1Q9NP62 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GCM1Q9NP62 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.76■□□□□ 0.43
GCM1Q9NP62 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GCM1Q9NP62 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GCM1Q9NP62 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.75■□□□□ 0.43
GCM1Q9NP62 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GCM1Q9NP62 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
GCM1Q9NP62 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GCM1Q9NP62 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.75■□□□□ 0.43
GCM1Q9NP62 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
GCM1Q9NP62 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GCM1Q9NP62 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
GCM1Q9NP62 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
GCM1Q9NP62 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.75■□□□□ 0.43
GCM1Q9NP62 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
GCM1Q9NP62 AC004911.1-201ENST00000416316 871 ntBASIC17.75■□□□□ 0.43
GCM1Q9NP62 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.75■□□□□ 0.43
GCM1Q9NP62 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.75■□□□□ 0.43
GCM1Q9NP62 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.75■□□□□ 0.43
GCM1Q9NP62 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
GCM1Q9NP62 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.75■□□□□ 0.43
GCM1Q9NP62 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.75■□□□□ 0.43
GCM1Q9NP62 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.75■□□□□ 0.43
GCM1Q9NP62 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.75■□□□□ 0.43
GCM1Q9NP62 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GCM1Q9NP62 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.75■□□□□ 0.43
GCM1Q9NP62 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
GCM1Q9NP62 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GCM1Q9NP62 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GCM1Q9NP62 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
GCM1Q9NP62 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GCM1Q9NP62 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.75■□□□□ 0.43
GCM1Q9NP62 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.75■□□□□ 0.43
GCM1Q9NP62 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GCM1Q9NP62 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.75■□□□□ 0.43
GCM1Q9NP62 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GCM1Q9NP62 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GCM1Q9NP62 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GCM1Q9NP62 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.74■□□□□ 0.43
GCM1Q9NP62 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GCM1Q9NP62 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GCM1Q9NP62 KRT16P2-201ENST00000414673 1423 ntBASIC17.74■□□□□ 0.43
GCM1Q9NP62 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms