Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRTM1Q9HBL6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRTM1Q9HBL6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
LRTM1Q9HBL6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.03■□□□□ 0.8
LRTM1Q9HBL6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRTM1Q9HBL6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LRTM1Q9HBL6 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRTM1Q9HBL6 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
LRTM1Q9HBL6 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRTM1Q9HBL6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LRTM1Q9HBL6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRTM1Q9HBL6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRTM1Q9HBL6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LRTM1Q9HBL6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.02■□□□□ 0.8
LRTM1Q9HBL6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.02■□□□□ 0.8
LRTM1Q9HBL6 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.02■□□□□ 0.8
LRTM1Q9HBL6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.02■□□□□ 0.8
LRTM1Q9HBL6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRTM1Q9HBL6 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
LRTM1Q9HBL6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
LRTM1Q9HBL6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRTM1Q9HBL6 SLC25A24-204ENST00000569674 2357 ntBASIC20.02■□□□□ 0.8
LRTM1Q9HBL6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.79
LRTM1Q9HBL6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LRTM1Q9HBL6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LRTM1Q9HBL6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LRTM1Q9HBL6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.02■□□□□ 0.79
LRTM1Q9HBL6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LRTM1Q9HBL6 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.02■□□□□ 0.79
LRTM1Q9HBL6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LRTM1Q9HBL6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
LRTM1Q9HBL6 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRTM1Q9HBL6 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRTM1Q9HBL6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRTM1Q9HBL6 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.01■□□□□ 0.79
LRTM1Q9HBL6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRTM1Q9HBL6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.01■□□□□ 0.79
LRTM1Q9HBL6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
LRTM1Q9HBL6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRTM1Q9HBL6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRTM1Q9HBL6 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRTM1Q9HBL6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.01■□□□□ 0.79
LRTM1Q9HBL6 SUDS3P1-201ENST00000505831 966 ntBASIC20.01■□□□□ 0.79
LRTM1Q9HBL6 EEF1DP3-203ENST00000566025 782 ntBASIC20.01■□□□□ 0.79
LRTM1Q9HBL6 AC053503.5-201ENST00000601508 636 ntBASIC20.01■□□□□ 0.79
LRTM1Q9HBL6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
LRTM1Q9HBL6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.01■□□□□ 0.79
LRTM1Q9HBL6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.01■□□□□ 0.79
LRTM1Q9HBL6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.01■□□□□ 0.79
LRTM1Q9HBL6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRTM1Q9HBL6 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
LRTM1Q9HBL6 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRTM1Q9HBL6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
LRTM1Q9HBL6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRTM1Q9HBL6 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
LRTM1Q9HBL6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRTM1Q9HBL6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRTM1Q9HBL6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20■□□□□ 0.79
LRTM1Q9HBL6 AL354811.1-201ENST00000610286 706 ntBASIC20■□□□□ 0.79
LRTM1Q9HBL6 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRTM1Q9HBL6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20■□□□□ 0.79
LRTM1Q9HBL6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
LRTM1Q9HBL6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
LRTM1Q9HBL6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRTM1Q9HBL6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRTM1Q9HBL6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRTM1Q9HBL6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.99■□□□□ 0.79
LRTM1Q9HBL6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRTM1Q9HBL6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRTM1Q9HBL6 TPRG1LP1-201ENST00000598702 760 ntBASIC19.99■□□□□ 0.79
LRTM1Q9HBL6 AL139246.5-201ENST00000606645 996 ntBASIC19.99■□□□□ 0.79
LRTM1Q9HBL6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.99■□□□□ 0.79
LRTM1Q9HBL6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRTM1Q9HBL6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
LRTM1Q9HBL6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRTM1Q9HBL6 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
LRTM1Q9HBL6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
LRTM1Q9HBL6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRTM1Q9HBL6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRTM1Q9HBL6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LRTM1Q9HBL6 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
LRTM1Q9HBL6 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.98■□□□□ 0.79
LRTM1Q9HBL6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.98■□□□□ 0.79
LRTM1Q9HBL6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRTM1Q9HBL6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRTM1Q9HBL6 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRTM1Q9HBL6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRTM1Q9HBL6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.98■□□□□ 0.79
LRTM1Q9HBL6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
LRTM1Q9HBL6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRTM1Q9HBL6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.97■□□□□ 0.79
LRTM1Q9HBL6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRTM1Q9HBL6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LRTM1Q9HBL6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.97■□□□□ 0.79
LRTM1Q9HBL6 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LRTM1Q9HBL6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRTM1Q9HBL6 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRTM1Q9HBL6 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRTM1Q9HBL6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.97■□□□□ 0.79
LRTM1Q9HBL6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms