Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRRC40Q9H9A6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
LRRC40Q9H9A6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.14■□□□□ 0.97
LRRC40Q9H9A6 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRRC40Q9H9A6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LRRC40Q9H9A6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRC40Q9H9A6 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LRRC40Q9H9A6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRC40Q9H9A6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.13■□□□□ 0.97
LRRC40Q9H9A6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
LRRC40Q9H9A6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
LRRC40Q9H9A6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
LRRC40Q9H9A6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.13■□□□□ 0.97
LRRC40Q9H9A6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.13■□□□□ 0.97
LRRC40Q9H9A6 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.13■□□□□ 0.97
LRRC40Q9H9A6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRC40Q9H9A6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRC40Q9H9A6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.13■□□□□ 0.97
LRRC40Q9H9A6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRC40Q9H9A6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRC40Q9H9A6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRC40Q9H9A6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
LRRC40Q9H9A6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.12■□□□□ 0.97
LRRC40Q9H9A6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
LRRC40Q9H9A6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRC40Q9H9A6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.12■□□□□ 0.97
LRRC40Q9H9A6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.12■□□□□ 0.97
LRRC40Q9H9A6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.12■□□□□ 0.97
LRRC40Q9H9A6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.12■□□□□ 0.97
LRRC40Q9H9A6 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.12■□□□□ 0.97
LRRC40Q9H9A6 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.12■□□□□ 0.97
LRRC40Q9H9A6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
LRRC40Q9H9A6 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRC40Q9H9A6 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRC40Q9H9A6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.11■□□□□ 0.97
LRRC40Q9H9A6 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC40Q9H9A6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC40Q9H9A6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC40Q9H9A6 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC40Q9H9A6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.11■□□□□ 0.97
LRRC40Q9H9A6 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.11■□□□□ 0.97
LRRC40Q9H9A6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.11■□□□□ 0.97
LRRC40Q9H9A6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.11■□□□□ 0.97
LRRC40Q9H9A6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.11■□□□□ 0.97
LRRC40Q9H9A6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC40Q9H9A6 AC010141.2-201ENST00000452426 721 ntBASIC21.11■□□□□ 0.97
LRRC40Q9H9A6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC40Q9H9A6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.11■□□□□ 0.97
LRRC40Q9H9A6 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.11■□□□□ 0.97
LRRC40Q9H9A6 CCDC92B-201ENST00000575506 885 ntBASIC21.11■□□□□ 0.97
LRRC40Q9H9A6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC40Q9H9A6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC40Q9H9A6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
LRRC40Q9H9A6 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC40Q9H9A6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
LRRC40Q9H9A6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
LRRC40Q9H9A6 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC40Q9H9A6 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.11■□□□□ 0.97
LRRC40Q9H9A6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC40Q9H9A6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
LRRC40Q9H9A6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC40Q9H9A6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC40Q9H9A6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC40Q9H9A6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC40Q9H9A6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.1■□□□□ 0.97
LRRC40Q9H9A6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.1■□□□□ 0.97
LRRC40Q9H9A6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC40Q9H9A6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC40Q9H9A6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC40Q9H9A6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC40Q9H9A6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.1■□□□□ 0.97
LRRC40Q9H9A6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.1■□□□□ 0.97
LRRC40Q9H9A6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.1■□□□□ 0.97
LRRC40Q9H9A6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.1■□□□□ 0.97
LRRC40Q9H9A6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC40Q9H9A6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC40Q9H9A6 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC40Q9H9A6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.1■□□□□ 0.97
LRRC40Q9H9A6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC40Q9H9A6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC40Q9H9A6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.1■□□□□ 0.97
LRRC40Q9H9A6 AC121338.2-201ENST00000622535 1744 ntBASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 AC006128.1-201ENST00000624704 1661 ntBASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 KRT18P14-201ENST00000534205 1250 ntBASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 DUX4L2-201ENST00000561772 1275 ntBASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms