Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS11Q9H270 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS11Q9H270 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
VPS11Q9H270 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
VPS11Q9H270 BX842568.3-201ENST00000418104 571 ntBASIC20.92■□□□□ 0.94
VPS11Q9H270 MIR4767-201ENST00000582827 78 ntBASIC20.92■□□□□ 0.94
VPS11Q9H270 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VPS11Q9H270 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
VPS11Q9H270 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VPS11Q9H270 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS11Q9H270 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS11Q9H270 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS11Q9H270 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.92■□□□□ 0.94
VPS11Q9H270 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.92■□□□□ 0.94
VPS11Q9H270 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VPS11Q9H270 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
VPS11Q9H270 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VPS11Q9H270 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.92■□□□□ 0.94
VPS11Q9H270 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
VPS11Q9H270 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.92■□□□□ 0.94
VPS11Q9H270 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
VPS11Q9H270 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS11Q9H270 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
VPS11Q9H270 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VPS11Q9H270 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
VPS11Q9H270 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS11Q9H270 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.91■□□□□ 0.94
VPS11Q9H270 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.91■□□□□ 0.94
VPS11Q9H270 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.91■□□□□ 0.94
VPS11Q9H270 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.91■□□□□ 0.94
VPS11Q9H270 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS11Q9H270 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.91■□□□□ 0.94
VPS11Q9H270 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.91■□□□□ 0.94
VPS11Q9H270 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VPS11Q9H270 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
VPS11Q9H270 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
VPS11Q9H270 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VPS11Q9H270 PLK5-205ENST00000642079 1969 ntBASIC20.9■□□□□ 0.94
VPS11Q9H270 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.9■□□□□ 0.94
VPS11Q9H270 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.9■□□□□ 0.94
VPS11Q9H270 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VPS11Q9H270 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.9■□□□□ 0.94
VPS11Q9H270 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS11Q9H270 UNC93B3-201ENST00000308076 687 ntBASIC20.9■□□□□ 0.94
VPS11Q9H270 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS11Q9H270 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS11Q9H270 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.9■□□□□ 0.94
VPS11Q9H270 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.9■□□□□ 0.94
VPS11Q9H270 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VPS11Q9H270 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VPS11Q9H270 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.9■□□□□ 0.94
VPS11Q9H270 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.9■□□□□ 0.94
VPS11Q9H270 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
VPS11Q9H270 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS11Q9H270 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VPS11Q9H270 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
VPS11Q9H270 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
VPS11Q9H270 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
VPS11Q9H270 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VPS11Q9H270 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS11Q9H270 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.89■□□□□ 0.93
VPS11Q9H270 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS11Q9H270 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.89■□□□□ 0.93
VPS11Q9H270 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VPS11Q9H270 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
VPS11Q9H270 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS11Q9H270 AC126544.1-201ENST00000580842 1059 ntBASIC20.89■□□□□ 0.93
VPS11Q9H270 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VPS11Q9H270 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.89■□□□□ 0.93
VPS11Q9H270 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS11Q9H270 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
VPS11Q9H270 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.89■□□□□ 0.93
VPS11Q9H270 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
VPS11Q9H270 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS11Q9H270 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VPS11Q9H270 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.88■□□□□ 0.93
VPS11Q9H270 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.88■□□□□ 0.93
VPS11Q9H270 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.88■□□□□ 0.93
VPS11Q9H270 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.88■□□□□ 0.93
VPS11Q9H270 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
VPS11Q9H270 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS11Q9H270 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS11Q9H270 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS11Q9H270 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
VPS11Q9H270 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
VPS11Q9H270 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.88■□□□□ 0.93
VPS11Q9H270 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.88■□□□□ 0.93
VPS11Q9H270 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS11Q9H270 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
VPS11Q9H270 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
VPS11Q9H270 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS11Q9H270 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VPS11Q9H270 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
VPS11Q9H270 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS11Q9H270 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS11Q9H270 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.87■□□□□ 0.93
VPS11Q9H270 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS11Q9H270 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.87■□□□□ 0.93
VPS11Q9H270 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS11Q9H270 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms