Protein–RNA interactions for Protein: Q9BQJ4

TMEM47, Transmembrane protein 47, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47Q9BQJ4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TMEM47Q9BQJ4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC24.35■■□□□ 1.49
TMEM47Q9BQJ4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
TMEM47Q9BQJ4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
TMEM47Q9BQJ4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TMEM47Q9BQJ4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
TMEM47Q9BQJ4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TMEM47Q9BQJ4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TMEM47Q9BQJ4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TMEM47Q9BQJ4 AC093787.1-201ENST00000450396 207 ntBASIC24.34■■□□□ 1.49
TMEM47Q9BQJ4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
TMEM47Q9BQJ4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC24.34■■□□□ 1.49
TMEM47Q9BQJ4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
TMEM47Q9BQJ4 Z98882.1-201ENST00000622160 2253 ntBASIC24.34■■□□□ 1.49
TMEM47Q9BQJ4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TMEM47Q9BQJ4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TMEM47Q9BQJ4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC24.34■■□□□ 1.49
TMEM47Q9BQJ4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TMEM47Q9BQJ4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TMEM47Q9BQJ4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC24.34■■□□□ 1.49
TMEM47Q9BQJ4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
TMEM47Q9BQJ4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TMEM47Q9BQJ4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TMEM47Q9BQJ4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TMEM47Q9BQJ4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
TMEM47Q9BQJ4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC24.33■■□□□ 1.49
TMEM47Q9BQJ4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
TMEM47Q9BQJ4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.33■■□□□ 1.49
TMEM47Q9BQJ4 LINC00565-201ENST00000562710 2331 ntBASIC24.33■■□□□ 1.49
TMEM47Q9BQJ4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC24.33■■□□□ 1.49
TMEM47Q9BQJ4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
TMEM47Q9BQJ4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TMEM47Q9BQJ4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC24.33■■□□□ 1.49
TMEM47Q9BQJ4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC24.33■■□□□ 1.49
TMEM47Q9BQJ4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC24.33■■□□□ 1.49
TMEM47Q9BQJ4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC24.33■■□□□ 1.49
TMEM47Q9BQJ4 OR10C1-204ENST00000622521 1039 ntBASIC24.33■■□□□ 1.49
TMEM47Q9BQJ4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
TMEM47Q9BQJ4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC24.33■■□□□ 1.48
TMEM47Q9BQJ4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
TMEM47Q9BQJ4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
TMEM47Q9BQJ4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
TMEM47Q9BQJ4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
TMEM47Q9BQJ4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC24.33■■□□□ 1.48
TMEM47Q9BQJ4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
TMEM47Q9BQJ4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
TMEM47Q9BQJ4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TMEM47Q9BQJ4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC24.32■■□□□ 1.48
TMEM47Q9BQJ4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC24.32■■□□□ 1.48
TMEM47Q9BQJ4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TMEM47Q9BQJ4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC24.32■■□□□ 1.48
TMEM47Q9BQJ4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TMEM47Q9BQJ4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC24.32■■□□□ 1.48
TMEM47Q9BQJ4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TMEM47Q9BQJ4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TMEM47Q9BQJ4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TMEM47Q9BQJ4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TMEM47Q9BQJ4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TMEM47Q9BQJ4 AC079834.2-201ENST00000609776 1949 ntBASIC24.31■■□□□ 1.48
TMEM47Q9BQJ4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TMEM47Q9BQJ4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
TMEM47Q9BQJ4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
TMEM47Q9BQJ4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
TMEM47Q9BQJ4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC24.31■■□□□ 1.48
TMEM47Q9BQJ4 RARRES2P4-201ENST00000514074 484 ntBASIC24.31■■□□□ 1.48
TMEM47Q9BQJ4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
TMEM47Q9BQJ4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TMEM47Q9BQJ4 AC069236.1-201ENST00000604339 616 ntBASIC24.31■■□□□ 1.48
TMEM47Q9BQJ4 MARS-234ENST00000630571 216 ntTSL 5 BASIC24.31■■□□□ 1.48
TMEM47Q9BQJ4 MARS-235ENST00000630803 183 ntTSL 3 BASIC24.31■■□□□ 1.48
TMEM47Q9BQJ4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TMEM47Q9BQJ4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TMEM47Q9BQJ4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC24.31■■□□□ 1.48
TMEM47Q9BQJ4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TMEM47Q9BQJ4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TMEM47Q9BQJ4 AL355802.2-201ENST00000402069 882 ntBASIC24.3■■□□□ 1.48
TMEM47Q9BQJ4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC24.3■■□□□ 1.48
TMEM47Q9BQJ4 AC008694.1-202ENST00000636953 945 ntBASIC24.3■■□□□ 1.48
TMEM47Q9BQJ4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TMEM47Q9BQJ4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TMEM47Q9BQJ4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TMEM47Q9BQJ4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TMEM47Q9BQJ4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC24.29■■□□□ 1.48
TMEM47Q9BQJ4 AL512625.2-201ENST00000417533 625 ntBASIC24.29■■□□□ 1.48
TMEM47Q9BQJ4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC24.29■■□□□ 1.48
TMEM47Q9BQJ4 AL138781.1-201ENST00000566567 1274 ntBASIC24.29■■□□□ 1.48
TMEM47Q9BQJ4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
TMEM47Q9BQJ4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
TMEM47Q9BQJ4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TMEM47Q9BQJ4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC24.29■■□□□ 1.48
TMEM47Q9BQJ4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TMEM47Q9BQJ4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TMEM47Q9BQJ4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TMEM47Q9BQJ4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
TMEM47Q9BQJ4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC24.28■■□□□ 1.48
TMEM47Q9BQJ4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
TMEM47Q9BQJ4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC24.28■■□□□ 1.48
TMEM47Q9BQJ4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC24.28■■□□□ 1.48
TMEM47Q9BQJ4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
TMEM47Q9BQJ4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms