Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.61■□□□□ 0.41
FOXC2Q99958 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.61■□□□□ 0.41
FOXC2Q99958 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FOXC2Q99958 AL445228.2-201ENST00000605589 952 ntBASIC17.61■□□□□ 0.41
FOXC2Q99958 AC012306.2-201ENST00000609350 630 ntBASIC17.61■□□□□ 0.41
FOXC2Q99958 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
FOXC2Q99958 AL049637.2-201ENST00000641778 930 ntBASIC17.61■□□□□ 0.41
FOXC2Q99958 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
FOXC2Q99958 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FOXC2Q99958 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FOXC2Q99958 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.6■□□□□ 0.41
FOXC2Q99958 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXC2Q99958 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXC2Q99958 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FOXC2Q99958 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.6■□□□□ 0.41
FOXC2Q99958 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.6■□□□□ 0.41
FOXC2Q99958 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.6■□□□□ 0.41
FOXC2Q99958 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.6■□□□□ 0.41
FOXC2Q99958 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.6■□□□□ 0.41
FOXC2Q99958 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
FOXC2Q99958 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.6■□□□□ 0.41
FOXC2Q99958 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.6■□□□□ 0.41
FOXC2Q99958 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.6■□□□□ 0.41
FOXC2Q99958 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.6■□□□□ 0.41
FOXC2Q99958 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
FOXC2Q99958 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXC2Q99958 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXC2Q99958 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXC2Q99958 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXC2Q99958 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXC2Q99958 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXC2Q99958 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXC2Q99958 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FOXC2Q99958 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
FOXC2Q99958 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXC2Q99958 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FOXC2Q99958 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXC2Q99958 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXC2Q99958 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FOXC2Q99958 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FOXC2Q99958 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.59■□□□□ 0.41
FOXC2Q99958 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.59■□□□□ 0.41
FOXC2Q99958 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.59■□□□□ 0.41
FOXC2Q99958 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.59■□□□□ 0.41
FOXC2Q99958 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.59■□□□□ 0.41
FOXC2Q99958 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.59■□□□□ 0.41
FOXC2Q99958 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.59■□□□□ 0.41
FOXC2Q99958 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FOXC2Q99958 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FOXC2Q99958 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXC2Q99958 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.59■□□□□ 0.41
FOXC2Q99958 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FOXC2Q99958 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.58■□□□□ 0.4
FOXC2Q99958 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
FOXC2Q99958 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXC2Q99958 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXC2Q99958 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.58■□□□□ 0.4
FOXC2Q99958 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
FOXC2Q99958 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.58■□□□□ 0.4
FOXC2Q99958 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
FOXC2Q99958 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
FOXC2Q99958 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.58■□□□□ 0.4
FOXC2Q99958 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.58■□□□□ 0.4
FOXC2Q99958 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.58■□□□□ 0.4
FOXC2Q99958 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.58■□□□□ 0.4
FOXC2Q99958 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.58■□□□□ 0.4
FOXC2Q99958 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
FOXC2Q99958 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
FOXC2Q99958 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.58■□□□□ 0.4
FOXC2Q99958 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.58■□□□□ 0.4
FOXC2Q99958 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXC2Q99958 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.58■□□□□ 0.4
FOXC2Q99958 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXC2Q99958 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.58■□□□□ 0.4
FOXC2Q99958 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXC2Q99958 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXC2Q99958 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXC2Q99958 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXC2Q99958 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
FOXC2Q99958 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.57■□□□□ 0.4
FOXC2Q99958 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXC2Q99958 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.57■□□□□ 0.4
FOXC2Q99958 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXC2Q99958 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXC2Q99958 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
FOXC2Q99958 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.57■□□□□ 0.4
FOXC2Q99958 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.57■□□□□ 0.4
FOXC2Q99958 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.57■□□□□ 0.4
FOXC2Q99958 AC061975.6-201ENST00000579045 1553 ntBASIC17.57■□□□□ 0.4
FOXC2Q99958 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXC2Q99958 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXC2Q99958 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
FOXC2Q99958 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FOXC2Q99958 KRT18P68-201ENST00000392293 1000 ntBASIC17.56■□□□□ 0.4
FOXC2Q99958 AC091799.1-201ENST00000422823 811 ntBASIC17.56■□□□□ 0.4
FOXC2Q99958 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FOXC2Q99958 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.56■□□□□ 0.4
FOXC2Q99958 AC133681.1-201ENST00000465482 601 ntBASIC17.56■□□□□ 0.4
FOXC2Q99958 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
FOXC2Q99958 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms