Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MUC4Q99102 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MUC4Q99102 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
MUC4Q99102 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MUC4Q99102 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
MUC4Q99102 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
MUC4Q99102 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MUC4Q99102 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MUC4Q99102 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC15.19■□□□□ 0.02
MUC4Q99102 AC055733.4-201ENST00000638462 1354 ntBASIC15.19■□□□□ 0.02
MUC4Q99102 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MUC4Q99102 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MUC4Q99102 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.19■□□□□ 0.02
MUC4Q99102 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
MUC4Q99102 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MUC4Q99102 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MUC4Q99102 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MUC4Q99102 AC005224.4-201ENST00000583262 1652 ntBASIC15.18■□□□□ 0.02
MUC4Q99102 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
MUC4Q99102 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MUC4Q99102 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
MUC4Q99102 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MUC4Q99102 PLK5-205ENST00000642079 1969 ntBASIC15.18■□□□□ 0.02
MUC4Q99102 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MUC4Q99102 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MUC4Q99102 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC15.18■□□□□ 0.02
MUC4Q99102 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC15.18■□□□□ 0.02
MUC4Q99102 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MUC4Q99102 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
MUC4Q99102 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MUC4Q99102 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.18■□□□□ 0.02
MUC4Q99102 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
MUC4Q99102 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MUC4Q99102 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MUC4Q99102 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC15.18■□□□□ 0.02
MUC4Q99102 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC15.18■□□□□ 0.02
MUC4Q99102 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC15.18■□□□□ 0.02
MUC4Q99102 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MUC4Q99102 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MUC4Q99102 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
MUC4Q99102 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
MUC4Q99102 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MUC4Q99102 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC15.17■□□□□ 0.02
MUC4Q99102 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
MUC4Q99102 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MUC4Q99102 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC15.17■□□□□ 0.02
MUC4Q99102 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
MUC4Q99102 STX5-203ENST00000394690 1568 ntTSL 5 BASIC15.17■□□□□ 0.02
MUC4Q99102 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MUC4Q99102 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC15.17■□□□□ 0.02
MUC4Q99102 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC15.17■□□□□ 0.02
MUC4Q99102 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MUC4Q99102 AC009237.3-201ENST00000393279 1427 ntBASIC15.17■□□□□ 0.02
MUC4Q99102 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC15.17■□□□□ 0.02
MUC4Q99102 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MUC4Q99102 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MUC4Q99102 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
MUC4Q99102 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MUC4Q99102 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC15.17■□□□□ 0.02
MUC4Q99102 STOX2-205ENST00000513034 807 ntTSL 3 BASIC15.17■□□□□ 0.02
MUC4Q99102 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MUC4Q99102 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC15.17■□□□□ 0.02
MUC4Q99102 AL358852.1-201ENST00000623174 1268 ntBASIC15.17■□□□□ 0.02
MUC4Q99102 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC15.16■□□□□ 0.02
MUC4Q99102 BX005040.4-201ENST00000637145 1518 ntBASIC15.16■□□□□ 0.02
MUC4Q99102 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MUC4Q99102 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
MUC4Q99102 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MUC4Q99102 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
MUC4Q99102 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MUC4Q99102 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MUC4Q99102 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MUC4Q99102 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MUC4Q99102 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MUC4Q99102 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MUC4Q99102 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC15.16■□□□□ 0.02
MUC4Q99102 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MUC4Q99102 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
MUC4Q99102 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
MUC4Q99102 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
MUC4Q99102 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC15.16■□□□□ 0.02
MUC4Q99102 AC092437.1-201ENST00000624794 1048 ntBASIC15.16■□□□□ 0.02
MUC4Q99102 AC066615.1-201ENST00000640911 628 ntBASIC15.16■□□□□ 0.02
MUC4Q99102 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15.16■□□□□ 0.02
MUC4Q99102 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC15.16■□□□□ 0.02
MUC4Q99102 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC15.16■□□□□ 0.02
MUC4Q99102 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MUC4Q99102 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MUC4Q99102 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.16■□□□□ 0.02
MUC4Q99102 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
MUC4Q99102 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MUC4Q99102 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MUC4Q99102 NT5C3AP1-201ENST00000394500 1012 ntBASIC15.15■□□□□ 0.02
MUC4Q99102 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC15.15■□□□□ 0.02
MUC4Q99102 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC15.15■□□□□ 0.02
MUC4Q99102 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC15.15■□□□□ 0.02
MUC4Q99102 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
MUC4Q99102 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC15.15■□□□□ 0.02
MUC4Q99102 TPRG1LP1-201ENST00000598702 760 ntBASIC15.15■□□□□ 0.02
MUC4Q99102 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms