Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL21A1Q96P44 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL21A1Q96P44 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL21A1Q96P44 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
COL21A1Q96P44 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.64■□□□□ 0.74
COL21A1Q96P44 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
COL21A1Q96P44 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.64■□□□□ 0.73
COL21A1Q96P44 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL21A1Q96P44 KRT18P14-201ENST00000534205 1250 ntBASIC19.64■□□□□ 0.73
COL21A1Q96P44 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.64■□□□□ 0.73
COL21A1Q96P44 AC087623.3-201ENST00000607047 1098 ntBASIC19.64■□□□□ 0.73
COL21A1Q96P44 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.64■□□□□ 0.73
COL21A1Q96P44 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL21A1Q96P44 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL21A1Q96P44 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
COL21A1Q96P44 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
COL21A1Q96P44 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL21A1Q96P44 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL21A1Q96P44 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
COL21A1Q96P44 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
COL21A1Q96P44 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL21A1Q96P44 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL21A1Q96P44 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL21A1Q96P44 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.63■□□□□ 0.73
COL21A1Q96P44 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL21A1Q96P44 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
COL21A1Q96P44 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL21A1Q96P44 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL21A1Q96P44 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL21A1Q96P44 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
COL21A1Q96P44 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.63■□□□□ 0.73
COL21A1Q96P44 AC079140.4-201ENST00000507448 529 ntBASIC19.63■□□□□ 0.73
COL21A1Q96P44 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL21A1Q96P44 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL21A1Q96P44 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL21A1Q96P44 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL21A1Q96P44 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL21A1Q96P44 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
COL21A1Q96P44 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL21A1Q96P44 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL21A1Q96P44 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.62■□□□□ 0.73
COL21A1Q96P44 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.62■□□□□ 0.73
COL21A1Q96P44 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL21A1Q96P44 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL21A1Q96P44 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL21A1Q96P44 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL21A1Q96P44 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.62■□□□□ 0.73
COL21A1Q96P44 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
COL21A1Q96P44 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.62■□□□□ 0.73
COL21A1Q96P44 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.62■□□□□ 0.73
COL21A1Q96P44 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
COL21A1Q96P44 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.62■□□□□ 0.73
COL21A1Q96P44 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL21A1Q96P44 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
COL21A1Q96P44 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.61■□□□□ 0.73
COL21A1Q96P44 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.61■□□□□ 0.73
COL21A1Q96P44 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL21A1Q96P44 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL21A1Q96P44 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.61■□□□□ 0.73
COL21A1Q96P44 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.61■□□□□ 0.73
COL21A1Q96P44 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL21A1Q96P44 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.61■□□□□ 0.73
COL21A1Q96P44 AC034268.1-201ENST00000441047 882 ntBASIC19.61■□□□□ 0.73
COL21A1Q96P44 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.61■□□□□ 0.73
COL21A1Q96P44 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.61■□□□□ 0.73
COL21A1Q96P44 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.61■□□□□ 0.73
COL21A1Q96P44 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
COL21A1Q96P44 AL157384.1-201ENST00000445995 2473 ntBASIC19.61■□□□□ 0.73
COL21A1Q96P44 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL21A1Q96P44 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL21A1Q96P44 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.6■□□□□ 0.73
COL21A1Q96P44 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL21A1Q96P44 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL21A1Q96P44 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL21A1Q96P44 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL21A1Q96P44 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL21A1Q96P44 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL21A1Q96P44 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL21A1Q96P44 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL21A1Q96P44 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL21A1Q96P44 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL21A1Q96P44 AL049796.1-201ENST00000565336 1766 ntBASIC19.6■□□□□ 0.73
COL21A1Q96P44 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL21A1Q96P44 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL21A1Q96P44 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL21A1Q96P44 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL21A1Q96P44 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.6■□□□□ 0.73
COL21A1Q96P44 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
COL21A1Q96P44 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
COL21A1Q96P44 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
COL21A1Q96P44 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.6■□□□□ 0.73
COL21A1Q96P44 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL21A1Q96P44 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL21A1Q96P44 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
COL21A1Q96P44 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.6■□□□□ 0.73
COL21A1Q96P44 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL21A1Q96P44 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
COL21A1Q96P44 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.59■□□□□ 0.73
COL21A1Q96P44 DUX4L2-201ENST00000561772 1275 ntBASIC19.59■□□□□ 0.73
COL21A1Q96P44 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms