Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.94■□□□□ 0.94
ECHDC3Q96DC8 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ECHDC3Q96DC8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ECHDC3Q96DC8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
ECHDC3Q96DC8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ECHDC3Q96DC8 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
ECHDC3Q96DC8 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.93■□□□□ 0.94
ECHDC3Q96DC8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ECHDC3Q96DC8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.93■□□□□ 0.94
ECHDC3Q96DC8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
ECHDC3Q96DC8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ECHDC3Q96DC8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.93■□□□□ 0.94
ECHDC3Q96DC8 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ECHDC3Q96DC8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.93■□□□□ 0.94
ECHDC3Q96DC8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
ECHDC3Q96DC8 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ECHDC3Q96DC8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
ECHDC3Q96DC8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ECHDC3Q96DC8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ECHDC3Q96DC8 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ECHDC3Q96DC8 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ECHDC3Q96DC8 AC006970.2-201ENST00000450065 779 ntBASIC20.92■□□□□ 0.94
ECHDC3Q96DC8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.92■□□□□ 0.94
ECHDC3Q96DC8 AL591742.1-201ENST00000604433 565 ntBASIC20.92■□□□□ 0.94
ECHDC3Q96DC8 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.92■□□□□ 0.94
ECHDC3Q96DC8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.92■□□□□ 0.94
ECHDC3Q96DC8 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ECHDC3Q96DC8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ECHDC3Q96DC8 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ECHDC3Q96DC8 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ECHDC3Q96DC8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ECHDC3Q96DC8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ECHDC3Q96DC8 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ECHDC3Q96DC8 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
ECHDC3Q96DC8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ECHDC3Q96DC8 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
ECHDC3Q96DC8 NCF1B-203ENST00000435988 1254 ntBASIC20.91■□□□□ 0.94
ECHDC3Q96DC8 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.91■□□□□ 0.94
ECHDC3Q96DC8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.91■□□□□ 0.94
ECHDC3Q96DC8 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.91■□□□□ 0.94
ECHDC3Q96DC8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ECHDC3Q96DC8 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.91■□□□□ 0.94
ECHDC3Q96DC8 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ECHDC3Q96DC8 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
ECHDC3Q96DC8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ECHDC3Q96DC8 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.91■□□□□ 0.94
ECHDC3Q96DC8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.91■□□□□ 0.94
ECHDC3Q96DC8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
ECHDC3Q96DC8 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.9■□□□□ 0.94
ECHDC3Q96DC8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ECHDC3Q96DC8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.9■□□□□ 0.94
ECHDC3Q96DC8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ECHDC3Q96DC8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ECHDC3Q96DC8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ECHDC3Q96DC8 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ECHDC3Q96DC8 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ECHDC3Q96DC8 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
ECHDC3Q96DC8 CYP2T1P-201ENST00000432607 1285 ntBASIC20.9■□□□□ 0.94
ECHDC3Q96DC8 AC133552.2-202ENST00000575694 574 ntBASIC20.9■□□□□ 0.94
ECHDC3Q96DC8 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.9■□□□□ 0.94
ECHDC3Q96DC8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ECHDC3Q96DC8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ECHDC3Q96DC8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ECHDC3Q96DC8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ECHDC3Q96DC8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
ECHDC3Q96DC8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
ECHDC3Q96DC8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.89■□□□□ 0.94
ECHDC3Q96DC8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ECHDC3Q96DC8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.89■□□□□ 0.94
ECHDC3Q96DC8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.89■□□□□ 0.94
ECHDC3Q96DC8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
ECHDC3Q96DC8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
ECHDC3Q96DC8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.89■□□□□ 0.93
ECHDC3Q96DC8 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
ECHDC3Q96DC8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ECHDC3Q96DC8 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ECHDC3Q96DC8 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.89■□□□□ 0.93
ECHDC3Q96DC8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.89■□□□□ 0.93
ECHDC3Q96DC8 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.89■□□□□ 0.93
ECHDC3Q96DC8 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.89■□□□□ 0.93
ECHDC3Q96DC8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.89■□□□□ 0.93
ECHDC3Q96DC8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ECHDC3Q96DC8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ECHDC3Q96DC8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ECHDC3Q96DC8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ECHDC3Q96DC8 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.88■□□□□ 0.93
ECHDC3Q96DC8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.88■□□□□ 0.93
ECHDC3Q96DC8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ECHDC3Q96DC8 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.88■□□□□ 0.93
ECHDC3Q96DC8 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.88■□□□□ 0.93
ECHDC3Q96DC8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.88■□□□□ 0.93
ECHDC3Q96DC8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
ECHDC3Q96DC8 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ECHDC3Q96DC8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ECHDC3Q96DC8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.88■□□□□ 0.93
ECHDC3Q96DC8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
ECHDC3Q96DC8 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ECHDC3Q96DC8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ECHDC3Q96DC8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ECHDC3Q96DC8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms