Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
ATP6V0A1Q93050 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
ATP6V0A1Q93050 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.38■■□□□ 1.33
ATP6V0A1Q93050 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
ATP6V0A1Q93050 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.38■■□□□ 1.33
ATP6V0A1Q93050 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
ATP6V0A1Q93050 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
ATP6V0A1Q93050 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
ATP6V0A1Q93050 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.38■■□□□ 1.33
ATP6V0A1Q93050 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
ATP6V0A1Q93050 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ATP6V0A1Q93050 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ATP6V0A1Q93050 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
ATP6V0A1Q93050 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ATP6V0A1Q93050 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ATP6V0A1Q93050 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.37■■□□□ 1.33
ATP6V0A1Q93050 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
ATP6V0A1Q93050 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
ATP6V0A1Q93050 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.37■■□□□ 1.33
ATP6V0A1Q93050 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
ATP6V0A1Q93050 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ATP6V0A1Q93050 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.37■■□□□ 1.33
ATP6V0A1Q93050 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
ATP6V0A1Q93050 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ATP6V0A1Q93050 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ATP6V0A1Q93050 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ATP6V0A1Q93050 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ATP6V0A1Q93050 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.36■■□□□ 1.33
ATP6V0A1Q93050 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ATP6V0A1Q93050 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
ATP6V0A1Q93050 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ATP6V0A1Q93050 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ATP6V0A1Q93050 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.36■■□□□ 1.33
ATP6V0A1Q93050 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ATP6V0A1Q93050 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.36■■□□□ 1.33
ATP6V0A1Q93050 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
ATP6V0A1Q93050 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
ATP6V0A1Q93050 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
ATP6V0A1Q93050 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.36■■□□□ 1.33
ATP6V0A1Q93050 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.36■■□□□ 1.33
ATP6V0A1Q93050 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
ATP6V0A1Q93050 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ATP6V0A1Q93050 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
ATP6V0A1Q93050 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
ATP6V0A1Q93050 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ATP6V0A1Q93050 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
ATP6V0A1Q93050 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.35■■□□□ 1.33
ATP6V0A1Q93050 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.35■■□□□ 1.33
ATP6V0A1Q93050 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ATP6V0A1Q93050 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ATP6V0A1Q93050 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23.35■■□□□ 1.33
ATP6V0A1Q93050 BX276092.2-201ENST00000417668 665 ntBASIC23.35■■□□□ 1.33
ATP6V0A1Q93050 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ATP6V0A1Q93050 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ATP6V0A1Q93050 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.35■■□□□ 1.33
ATP6V0A1Q93050 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.35■■□□□ 1.33
ATP6V0A1Q93050 AL591742.1-201ENST00000604433 565 ntBASIC23.35■■□□□ 1.33
ATP6V0A1Q93050 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.35■■□□□ 1.33
ATP6V0A1Q93050 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ATP6V0A1Q93050 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ATP6V0A1Q93050 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ATP6V0A1Q93050 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
ATP6V0A1Q93050 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ATP6V0A1Q93050 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ATP6V0A1Q93050 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ATP6V0A1Q93050 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
ATP6V0A1Q93050 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.34■■□□□ 1.33
ATP6V0A1Q93050 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.34■■□□□ 1.33
ATP6V0A1Q93050 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ATP6V0A1Q93050 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC23.34■■□□□ 1.33
ATP6V0A1Q93050 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.34■■□□□ 1.33
ATP6V0A1Q93050 RNA5SP413-201ENST00000516373 109 ntBASIC23.34■■□□□ 1.33
ATP6V0A1Q93050 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.34■■□□□ 1.33
ATP6V0A1Q93050 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ATP6V0A1Q93050 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ATP6V0A1Q93050 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ATP6V0A1Q93050 AC092118.2-201ENST00000613495 667 ntBASIC23.34■■□□□ 1.33
ATP6V0A1Q93050 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
ATP6V0A1Q93050 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ATP6V0A1Q93050 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ATP6V0A1Q93050 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ATP6V0A1Q93050 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.34■■□□□ 1.33
ATP6V0A1Q93050 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ATP6V0A1Q93050 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
ATP6V0A1Q93050 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ATP6V0A1Q93050 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC23.33■■□□□ 1.33
ATP6V0A1Q93050 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
ATP6V0A1Q93050 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
ATP6V0A1Q93050 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.33
ATP6V0A1Q93050 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ATP6V0A1Q93050 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.33■■□□□ 1.33
ATP6V0A1Q93050 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.33■■□□□ 1.33
ATP6V0A1Q93050 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ATP6V0A1Q93050 AL162412.1-201ENST00000567129 965 ntBASIC23.33■■□□□ 1.33
ATP6V0A1Q93050 AC066615.1-201ENST00000640911 628 ntBASIC23.33■■□□□ 1.33
ATP6V0A1Q93050 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ATP6V0A1Q93050 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
ATP6V0A1Q93050 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.32
ATP6V0A1Q93050 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATP6V0A1Q93050 AC244015.2-201ENST00000616358 1861 ntBASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms