Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 KRT17P3-201ENST00000420566 1262 ntBASIC23.73■■□□□ 1.39
USP6NLQ92738 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.73■■□□□ 1.39
USP6NLQ92738 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC23.73■■□□□ 1.39
USP6NLQ92738 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
USP6NLQ92738 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
USP6NLQ92738 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
USP6NLQ92738 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
USP6NLQ92738 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
USP6NLQ92738 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
USP6NLQ92738 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
USP6NLQ92738 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
USP6NLQ92738 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
USP6NLQ92738 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
USP6NLQ92738 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
USP6NLQ92738 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC23.72■■□□□ 1.39
USP6NLQ92738 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC23.72■■□□□ 1.39
USP6NLQ92738 FAM197Y4-202ENST00000622692 608 ntBASIC23.72■■□□□ 1.39
USP6NLQ92738 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC23.72■■□□□ 1.39
USP6NLQ92738 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
USP6NLQ92738 AC092368.3-202ENST00000574180 1591 ntBASIC23.72■■□□□ 1.39
USP6NLQ92738 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
USP6NLQ92738 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
USP6NLQ92738 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.71■■□□□ 1.39
USP6NLQ92738 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.71■■□□□ 1.39
USP6NLQ92738 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
USP6NLQ92738 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
USP6NLQ92738 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC23.71■■□□□ 1.39
USP6NLQ92738 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC23.71■■□□□ 1.39
USP6NLQ92738 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
USP6NLQ92738 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC23.71■■□□□ 1.39
USP6NLQ92738 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.39
USP6NLQ92738 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.7■■□□□ 1.39
USP6NLQ92738 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
USP6NLQ92738 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
USP6NLQ92738 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
USP6NLQ92738 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC23.7■■□□□ 1.38
USP6NLQ92738 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC23.7■■□□□ 1.38
USP6NLQ92738 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC23.7■■□□□ 1.38
USP6NLQ92738 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC23.7■■□□□ 1.38
USP6NLQ92738 AC073912.3-201ENST00000624414 853 ntBASIC23.7■■□□□ 1.38
USP6NLQ92738 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
USP6NLQ92738 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.7■■□□□ 1.38
USP6NLQ92738 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
USP6NLQ92738 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
USP6NLQ92738 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
USP6NLQ92738 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
USP6NLQ92738 AC092053.2-201ENST00000640557 1818 ntBASIC23.69■■□□□ 1.38
USP6NLQ92738 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
USP6NLQ92738 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
USP6NLQ92738 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
USP6NLQ92738 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
USP6NLQ92738 GXYLT1P3-201ENST00000453058 1193 ntBASIC23.69■■□□□ 1.38
USP6NLQ92738 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
USP6NLQ92738 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.69■■□□□ 1.38
USP6NLQ92738 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC23.69■■□□□ 1.38
USP6NLQ92738 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC23.69■■□□□ 1.38
USP6NLQ92738 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
USP6NLQ92738 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
USP6NLQ92738 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
USP6NLQ92738 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
USP6NLQ92738 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.69■■□□□ 1.38
USP6NLQ92738 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
USP6NLQ92738 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.68■■□□□ 1.38
USP6NLQ92738 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
USP6NLQ92738 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
USP6NLQ92738 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
USP6NLQ92738 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC23.68■■□□□ 1.38
USP6NLQ92738 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
USP6NLQ92738 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC23.68■■□□□ 1.38
USP6NLQ92738 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC23.68■■□□□ 1.38
USP6NLQ92738 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
USP6NLQ92738 AC069544.1-201ENST00000609399 999 ntBASIC23.68■■□□□ 1.38
USP6NLQ92738 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
USP6NLQ92738 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
USP6NLQ92738 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
USP6NLQ92738 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
USP6NLQ92738 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
USP6NLQ92738 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC23.67■■□□□ 1.38
USP6NLQ92738 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
USP6NLQ92738 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.67■■□□□ 1.38
USP6NLQ92738 ECEL1P3-201ENST00000427961 737 ntBASIC23.67■■□□□ 1.38
USP6NLQ92738 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
USP6NLQ92738 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC23.67■■□□□ 1.38
USP6NLQ92738 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
USP6NLQ92738 SOX15-203ENST00000570788 1093 ntBASIC23.67■■□□□ 1.38
USP6NLQ92738 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
USP6NLQ92738 KLF2-202ENST00000592003 564 ntTSL 3 BASIC23.67■■□□□ 1.38
USP6NLQ92738 SPIB-206ENST00000596074 847 ntTSL 2 BASIC23.67■■□□□ 1.38
USP6NLQ92738 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
USP6NLQ92738 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
USP6NLQ92738 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
USP6NLQ92738 C11orf96-202ENST00000528572 1834 ntBASIC23.66■■□□□ 1.38
USP6NLQ92738 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23.66■■□□□ 1.38
USP6NLQ92738 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
USP6NLQ92738 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
USP6NLQ92738 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
USP6NLQ92738 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC23.66■■□□□ 1.38
USP6NLQ92738 OR2A1-AS1-207ENST00000486094 819 ntBASIC23.66■■□□□ 1.38
USP6NLQ92738 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
USP6NLQ92738 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms