Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRUB1Q8WWH5 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.07■□□□□ 0.64
TRUB1Q8WWH5 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRUB1Q8WWH5 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRUB1Q8WWH5 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRUB1Q8WWH5 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRUB1Q8WWH5 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRUB1Q8WWH5 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.06■□□□□ 0.64
TRUB1Q8WWH5 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.06■□□□□ 0.64
TRUB1Q8WWH5 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.06■□□□□ 0.64
TRUB1Q8WWH5 AC006455.2-201ENST00000429931 906 ntBASIC19.06■□□□□ 0.64
TRUB1Q8WWH5 MIR6724-1-201ENST00000616420 92 ntBASIC19.06■□□□□ 0.64
TRUB1Q8WWH5 MIR6724-2-201ENST00000616483 92 ntBASIC19.06■□□□□ 0.64
TRUB1Q8WWH5 MIR6724-4-201ENST00000617390 92 ntBASIC19.06■□□□□ 0.64
TRUB1Q8WWH5 MIR6724-3-201ENST00000622482 92 ntBASIC19.06■□□□□ 0.64
TRUB1Q8WWH5 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRUB1Q8WWH5 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.06■□□□□ 0.64
TRUB1Q8WWH5 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRUB1Q8WWH5 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRUB1Q8WWH5 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
TRUB1Q8WWH5 PCDHAC2-203ENST00000615316 3011 ntBASIC19.06■□□□□ 0.64
TRUB1Q8WWH5 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRUB1Q8WWH5 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRUB1Q8WWH5 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
TRUB1Q8WWH5 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRUB1Q8WWH5 AP004607.7-201ENST00000527152 1677 ntBASIC19.05■□□□□ 0.64
TRUB1Q8WWH5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRUB1Q8WWH5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TRUB1Q8WWH5 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.05■□□□□ 0.64
TRUB1Q8WWH5 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRUB1Q8WWH5 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.05■□□□□ 0.64
TRUB1Q8WWH5 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.05■□□□□ 0.64
TRUB1Q8WWH5 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.05■□□□□ 0.64
TRUB1Q8WWH5 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TRUB1Q8WWH5 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRUB1Q8WWH5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.05■□□□□ 0.64
TRUB1Q8WWH5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRUB1Q8WWH5 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRUB1Q8WWH5 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRUB1Q8WWH5 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRUB1Q8WWH5 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TRUB1Q8WWH5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRUB1Q8WWH5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRUB1Q8WWH5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.05■□□□□ 0.64
TRUB1Q8WWH5 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRUB1Q8WWH5 AC098818.2-201ENST00000564925 2320 ntBASIC19.05■□□□□ 0.64
TRUB1Q8WWH5 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRUB1Q8WWH5 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB1Q8WWH5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB1Q8WWH5 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.04■□□□□ 0.64
TRUB1Q8WWH5 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
TRUB1Q8WWH5 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB1Q8WWH5 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB1Q8WWH5 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
TRUB1Q8WWH5 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB1Q8WWH5 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB1Q8WWH5 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB1Q8WWH5 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.04■□□□□ 0.64
TRUB1Q8WWH5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TRUB1Q8WWH5 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB1Q8WWH5 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.04■□□□□ 0.64
TRUB1Q8WWH5 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.04■□□□□ 0.64
TRUB1Q8WWH5 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.04■□□□□ 0.64
TRUB1Q8WWH5 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TRUB1Q8WWH5 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB1Q8WWH5 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB1Q8WWH5 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB1Q8WWH5 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB1Q8WWH5 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB1Q8WWH5 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB1Q8WWH5 AC073314.1-201ENST00000568729 2216 ntBASIC19.04■□□□□ 0.64
TRUB1Q8WWH5 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB1Q8WWH5 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRUB1Q8WWH5 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRUB1Q8WWH5 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRUB1Q8WWH5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRUB1Q8WWH5 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
TRUB1Q8WWH5 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRUB1Q8WWH5 PLK5-205ENST00000642079 1969 ntBASIC19.03■□□□□ 0.64
TRUB1Q8WWH5 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.03■□□□□ 0.64
TRUB1Q8WWH5 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.03■□□□□ 0.64
TRUB1Q8WWH5 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRUB1Q8WWH5 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRUB1Q8WWH5 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.03■□□□□ 0.64
TRUB1Q8WWH5 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TRUB1Q8WWH5 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRUB1Q8WWH5 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRUB1Q8WWH5 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.03■□□□□ 0.64
TRUB1Q8WWH5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRUB1Q8WWH5 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRUB1Q8WWH5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRUB1Q8WWH5 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRUB1Q8WWH5 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.02■□□□□ 0.64
TRUB1Q8WWH5 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TRUB1Q8WWH5 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRUB1Q8WWH5 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRUB1Q8WWH5 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRUB1Q8WWH5 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.02■□□□□ 0.64
TRUB1Q8WWH5 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRUB1Q8WWH5 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms