Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
HMGB4Q8WW32 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.95■□□□□ 0.94
HMGB4Q8WW32 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMGB4Q8WW32 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
HMGB4Q8WW32 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HMGB4Q8WW32 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.95■□□□□ 0.94
HMGB4Q8WW32 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMGB4Q8WW32 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HMGB4Q8WW32 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMGB4Q8WW32 RPS2P4-201ENST00000476944 856 ntBASIC20.95■□□□□ 0.94
HMGB4Q8WW32 AC100791.3-201ENST00000617619 330 ntBASIC20.95■□□□□ 0.94
HMGB4Q8WW32 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
HMGB4Q8WW32 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.95■□□□□ 0.94
HMGB4Q8WW32 C1orf229-201ENST00000623686 2258 ntBASIC20.95■□□□□ 0.94
HMGB4Q8WW32 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMGB4Q8WW32 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.95■□□□□ 0.94
HMGB4Q8WW32 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HMGB4Q8WW32 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
HMGB4Q8WW32 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMGB4Q8WW32 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMGB4Q8WW32 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMGB4Q8WW32 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.94■□□□□ 0.94
HMGB4Q8WW32 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMGB4Q8WW32 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HMGB4Q8WW32 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HMGB4Q8WW32 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.94■□□□□ 0.94
HMGB4Q8WW32 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HMGB4Q8WW32 AL589743.5-201ENST00000616611 1050 ntBASIC20.94■□□□□ 0.94
HMGB4Q8WW32 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
HMGB4Q8WW32 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMGB4Q8WW32 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.94■□□□□ 0.94
HMGB4Q8WW32 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
HMGB4Q8WW32 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HMGB4Q8WW32 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
HMGB4Q8WW32 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HMGB4Q8WW32 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMGB4Q8WW32 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.93■□□□□ 0.94
HMGB4Q8WW32 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGB4Q8WW32 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGB4Q8WW32 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGB4Q8WW32 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.93■□□□□ 0.94
HMGB4Q8WW32 MCRIP2P1-201ENST00000394346 511 ntBASIC20.93■□□□□ 0.94
HMGB4Q8WW32 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.93■□□□□ 0.94
HMGB4Q8WW32 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
HMGB4Q8WW32 AC060766.5-201ENST00000590539 871 ntBASIC20.93■□□□□ 0.94
HMGB4Q8WW32 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMGB4Q8WW32 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
HMGB4Q8WW32 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMGB4Q8WW32 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGB4Q8WW32 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGB4Q8WW32 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGB4Q8WW32 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.92■□□□□ 0.94
HMGB4Q8WW32 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
HMGB4Q8WW32 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGB4Q8WW32 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGB4Q8WW32 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
HMGB4Q8WW32 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HMGB4Q8WW32 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
HMGB4Q8WW32 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGB4Q8WW32 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGB4Q8WW32 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
HMGB4Q8WW32 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGB4Q8WW32 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
HMGB4Q8WW32 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGB4Q8WW32 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGB4Q8WW32 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
HMGB4Q8WW32 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HMGB4Q8WW32 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMGB4Q8WW32 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMGB4Q8WW32 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HMGB4Q8WW32 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.91■□□□□ 0.94
HMGB4Q8WW32 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.91■□□□□ 0.94
HMGB4Q8WW32 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.91■□□□□ 0.94
HMGB4Q8WW32 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HMGB4Q8WW32 AL596275.1-201ENST00000423464 877 ntBASIC20.91■□□□□ 0.94
HMGB4Q8WW32 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.91■□□□□ 0.94
HMGB4Q8WW32 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HMGB4Q8WW32 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.91■□□□□ 0.94
HMGB4Q8WW32 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMGB4Q8WW32 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.91■□□□□ 0.94
HMGB4Q8WW32 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.91■□□□□ 0.94
HMGB4Q8WW32 HLA-B-256ENST00000639848 1089 ntBASIC20.91■□□□□ 0.94
HMGB4Q8WW32 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMGB4Q8WW32 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGB4Q8WW32 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
HMGB4Q8WW32 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.9■□□□□ 0.94
HMGB4Q8WW32 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGB4Q8WW32 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
HMGB4Q8WW32 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGB4Q8WW32 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.9■□□□□ 0.94
HMGB4Q8WW32 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGB4Q8WW32 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
HMGB4Q8WW32 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGB4Q8WW32 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.9■□□□□ 0.94
HMGB4Q8WW32 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.9■□□□□ 0.94
HMGB4Q8WW32 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.9■□□□□ 0.94
HMGB4Q8WW32 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HMGB4Q8WW32 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.9■□□□□ 0.94
HMGB4Q8WW32 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
HMGB4Q8WW32 AC068473.5-201ENST00000616428 2072 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms