Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM11BQ8TCY0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM11BQ8TCY0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM11BQ8TCY0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
SMIM11BQ8TCY0 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
SMIM11BQ8TCY0 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC13.53□□□□□ -0.24
SMIM11BQ8TCY0 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM11BQ8TCY0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC13.53□□□□□ -0.24
SMIM11BQ8TCY0 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SMIM11BQ8TCY0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC13.53□□□□□ -0.24
SMIM11BQ8TCY0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC13.53□□□□□ -0.24
SMIM11BQ8TCY0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM11BQ8TCY0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM11BQ8TCY0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM11BQ8TCY0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC13.53□□□□□ -0.24
SMIM11BQ8TCY0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC13.53□□□□□ -0.24
SMIM11BQ8TCY0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM11BQ8TCY0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SMIM11BQ8TCY0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM11BQ8TCY0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC13.53□□□□□ -0.24
SMIM11BQ8TCY0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM11BQ8TCY0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC13.53□□□□□ -0.24
SMIM11BQ8TCY0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
SMIM11BQ8TCY0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM11BQ8TCY0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM11BQ8TCY0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC13.53□□□□□ -0.24
SMIM11BQ8TCY0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM11BQ8TCY0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM11BQ8TCY0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM11BQ8TCY0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC13.52□□□□□ -0.24
SMIM11BQ8TCY0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.24
SMIM11BQ8TCY0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC13.52□□□□□ -0.24
SMIM11BQ8TCY0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SMIM11BQ8TCY0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
SMIM11BQ8TCY0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM11BQ8TCY0 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SMIM11BQ8TCY0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC13.52□□□□□ -0.25
SMIM11BQ8TCY0 AC139795.1-202ENST00000500444 432 ntBASIC13.52□□□□□ -0.25
SMIM11BQ8TCY0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC13.52□□□□□ -0.25
SMIM11BQ8TCY0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC13.52□□□□□ -0.25
SMIM11BQ8TCY0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM11BQ8TCY0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM11BQ8TCY0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC13.52□□□□□ -0.25
SMIM11BQ8TCY0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM11BQ8TCY0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM11BQ8TCY0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
SMIM11BQ8TCY0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC13.52□□□□□ -0.25
SMIM11BQ8TCY0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM11BQ8TCY0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
SMIM11BQ8TCY0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM11BQ8TCY0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC13.52□□□□□ -0.25
SMIM11BQ8TCY0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM11BQ8TCY0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM11BQ8TCY0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC13.52□□□□□ -0.25
SMIM11BQ8TCY0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM11BQ8TCY0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
SMIM11BQ8TCY0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM11BQ8TCY0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM11BQ8TCY0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
SMIM11BQ8TCY0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
SMIM11BQ8TCY0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM11BQ8TCY0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC13.51□□□□□ -0.25
SMIM11BQ8TCY0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM11BQ8TCY0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM11BQ8TCY0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM11BQ8TCY0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SMIM11BQ8TCY0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM11BQ8TCY0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM11BQ8TCY0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM11BQ8TCY0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM11BQ8TCY0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SMIM11BQ8TCY0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM11BQ8TCY0 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
SMIM11BQ8TCY0 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC13.51□□□□□ -0.25
SMIM11BQ8TCY0 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC13.51□□□□□ -0.25
SMIM11BQ8TCY0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM11BQ8TCY0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SMIM11BQ8TCY0 AC116562.4-201ENST00000641316 2276 ntBASIC13.51□□□□□ -0.25
SMIM11BQ8TCY0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC13.51□□□□□ -0.25
SMIM11BQ8TCY0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC13.51□□□□□ -0.25
SMIM11BQ8TCY0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11BQ8TCY0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
SMIM11BQ8TCY0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC13.5□□□□□ -0.25
SMIM11BQ8TCY0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11BQ8TCY0 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11BQ8TCY0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11BQ8TCY0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC13.5□□□□□ -0.25
SMIM11BQ8TCY0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
SMIM11BQ8TCY0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC13.5□□□□□ -0.25
SMIM11BQ8TCY0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11BQ8TCY0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11BQ8TCY0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11BQ8TCY0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SMIM11BQ8TCY0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11BQ8TCY0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11BQ8TCY0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11BQ8TCY0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11BQ8TCY0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SMIM11BQ8TCY0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11BQ8TCY0 MIR7108-201ENST00000614319 87 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms