Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 AC121338.2-201ENST00000622535 1744 ntBASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNIH3Q8TBE1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNIH3Q8TBE1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.04■□□□□ 0.64
CNIH3Q8TBE1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNIH3Q8TBE1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNIH3Q8TBE1 BX664725.1-201ENST00000438252 379 ntBASIC19.04■□□□□ 0.64
CNIH3Q8TBE1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.04■□□□□ 0.64
CNIH3Q8TBE1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNIH3Q8TBE1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNIH3Q8TBE1 AL162377.1-201ENST00000618844 1793 ntBASIC19.04■□□□□ 0.64
CNIH3Q8TBE1 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNIH3Q8TBE1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNIH3Q8TBE1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNIH3Q8TBE1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNIH3Q8TBE1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.03■□□□□ 0.64
CNIH3Q8TBE1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.03■□□□□ 0.64
CNIH3Q8TBE1 AL034346.1-201ENST00000568244 1277 ntBASIC19.03■□□□□ 0.64
CNIH3Q8TBE1 MTDHP2-201ENST00000601468 714 ntBASIC19.03■□□□□ 0.64
CNIH3Q8TBE1 AC092028.1-203ENST00000608262 953 ntBASIC19.03■□□□□ 0.64
CNIH3Q8TBE1 AC068587.7-201ENST00000641602 218 ntBASIC19.03■□□□□ 0.64
CNIH3Q8TBE1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CNIH3Q8TBE1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CNIH3Q8TBE1 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNIH3Q8TBE1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNIH3Q8TBE1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.03■□□□□ 0.64
CNIH3Q8TBE1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.03■□□□□ 0.64
CNIH3Q8TBE1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNIH3Q8TBE1 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CNIH3Q8TBE1 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNIH3Q8TBE1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNIH3Q8TBE1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CNIH3Q8TBE1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNIH3Q8TBE1 AP004607.7-201ENST00000527152 1677 ntBASIC19.02■□□□□ 0.64
CNIH3Q8TBE1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNIH3Q8TBE1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNIH3Q8TBE1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.02■□□□□ 0.64
CNIH3Q8TBE1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNIH3Q8TBE1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CNIH3Q8TBE1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.02■□□□□ 0.64
CNIH3Q8TBE1 pRNA.6-201ENST00000610482 90 ntBASIC19.02■□□□□ 0.64
CNIH3Q8TBE1 pRNA.5-201ENST00000612139 90 ntBASIC19.02■□□□□ 0.64
CNIH3Q8TBE1 pRNA.11-201ENST00000618423 90 ntBASIC19.02■□□□□ 0.64
CNIH3Q8TBE1 pRNA.13-201ENST00000619112 90 ntBASIC19.02■□□□□ 0.64
CNIH3Q8TBE1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNIH3Q8TBE1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNIH3Q8TBE1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.02■□□□□ 0.63
CNIH3Q8TBE1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.63
CNIH3Q8TBE1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
CNIH3Q8TBE1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.02■□□□□ 0.63
CNIH3Q8TBE1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
CNIH3Q8TBE1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CNIH3Q8TBE1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CNIH3Q8TBE1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.02■□□□□ 0.63
CNIH3Q8TBE1 AC099778.1-201ENST00000568593 1911 ntBASIC19.02■□□□□ 0.63
CNIH3Q8TBE1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
CNIH3Q8TBE1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNIH3Q8TBE1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNIH3Q8TBE1 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.01■□□□□ 0.63
CNIH3Q8TBE1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.01■□□□□ 0.63
CNIH3Q8TBE1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNIH3Q8TBE1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNIH3Q8TBE1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.01■□□□□ 0.63
CNIH3Q8TBE1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNIH3Q8TBE1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNIH3Q8TBE1 AC006455.2-201ENST00000429931 906 ntBASIC19.01■□□□□ 0.63
CNIH3Q8TBE1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.01■□□□□ 0.63
CNIH3Q8TBE1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNIH3Q8TBE1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNIH3Q8TBE1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CNIH3Q8TBE1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNIH3Q8TBE1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNIH3Q8TBE1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.01■□□□□ 0.63
CNIH3Q8TBE1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNIH3Q8TBE1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19■□□□□ 0.63
CNIH3Q8TBE1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNIH3Q8TBE1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CNIH3Q8TBE1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19■□□□□ 0.63
CNIH3Q8TBE1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CNIH3Q8TBE1 AC010141.3-201ENST00000456659 717 ntBASIC19■□□□□ 0.63
CNIH3Q8TBE1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19■□□□□ 0.63
CNIH3Q8TBE1 AC087239.1-201ENST00000622671 572 ntBASIC19■□□□□ 0.63
CNIH3Q8TBE1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19■□□□□ 0.63
CNIH3Q8TBE1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CNIH3Q8TBE1 SMG8-203ENST00000578922 2178 ntBASIC19■□□□□ 0.63
CNIH3Q8TBE1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNIH3Q8TBE1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNIH3Q8TBE1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CNIH3Q8TBE1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNIH3Q8TBE1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNIH3Q8TBE1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNIH3Q8TBE1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms