Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
LINC01560Q8TB33 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01560Q8TB33 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.09■□□□□ 0.49
LINC01560Q8TB33 AC100791.3-201ENST00000617619 330 ntBASIC18.09■□□□□ 0.49
LINC01560Q8TB33 AC073648.6-201ENST00000641589 218 ntBASIC18.09■□□□□ 0.49
LINC01560Q8TB33 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01560Q8TB33 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.09■□□□□ 0.49
LINC01560Q8TB33 AC068473.5-201ENST00000616428 2072 ntBASIC18.09■□□□□ 0.49
LINC01560Q8TB33 FAM99A-202ENST00000538190 1989 ntBASIC18.09■□□□□ 0.49
LINC01560Q8TB33 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01560Q8TB33 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LINC01560Q8TB33 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01560Q8TB33 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01560Q8TB33 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01560Q8TB33 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01560Q8TB33 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01560Q8TB33 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01560Q8TB33 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.09■□□□□ 0.49
LINC01560Q8TB33 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01560Q8TB33 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LINC01560Q8TB33 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LINC01560Q8TB33 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
LINC01560Q8TB33 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.08■□□□□ 0.49
LINC01560Q8TB33 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LINC01560Q8TB33 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LINC01560Q8TB33 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LINC01560Q8TB33 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
LINC01560Q8TB33 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC01560Q8TB33 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.08■□□□□ 0.48
LINC01560Q8TB33 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.08■□□□□ 0.48
LINC01560Q8TB33 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
LINC01560Q8TB33 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC01560Q8TB33 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC01560Q8TB33 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LINC01560Q8TB33 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC01560Q8TB33 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.07■□□□□ 0.48
LINC01560Q8TB33 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01560Q8TB33 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01560Q8TB33 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01560Q8TB33 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01560Q8TB33 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01560Q8TB33 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01560Q8TB33 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.07■□□□□ 0.48
LINC01560Q8TB33 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LINC01560Q8TB33 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.07■□□□□ 0.48
LINC01560Q8TB33 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
LINC01560Q8TB33 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01560Q8TB33 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01560Q8TB33 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01560Q8TB33 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01560Q8TB33 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.07■□□□□ 0.48
LINC01560Q8TB33 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01560Q8TB33 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01560Q8TB33 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01560Q8TB33 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01560Q8TB33 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.06■□□□□ 0.48
LINC01560Q8TB33 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.06■□□□□ 0.48
LINC01560Q8TB33 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01560Q8TB33 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.06■□□□□ 0.48
LINC01560Q8TB33 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01560Q8TB33 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01560Q8TB33 MCRIP2P1-201ENST00000394346 511 ntBASIC18.06■□□□□ 0.48
LINC01560Q8TB33 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
LINC01560Q8TB33 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
LINC01560Q8TB33 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.06■□□□□ 0.48
LINC01560Q8TB33 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.06■□□□□ 0.48
LINC01560Q8TB33 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01560Q8TB33 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.06■□□□□ 0.48
LINC01560Q8TB33 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01560Q8TB33 AL589743.5-201ENST00000616611 1050 ntBASIC18.06■□□□□ 0.48
LINC01560Q8TB33 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01560Q8TB33 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01560Q8TB33 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01560Q8TB33 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
LINC01560Q8TB33 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01560Q8TB33 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01560Q8TB33 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01560Q8TB33 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
LINC01560Q8TB33 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01560Q8TB33 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.05■□□□□ 0.48
LINC01560Q8TB33 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.05■□□□□ 0.48
LINC01560Q8TB33 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
LINC01560Q8TB33 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01560Q8TB33 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.05■□□□□ 0.48
LINC01560Q8TB33 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.05■□□□□ 0.48
LINC01560Q8TB33 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01560Q8TB33 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01560Q8TB33 KRT18P68-201ENST00000392293 1000 ntBASIC18.05■□□□□ 0.48
LINC01560Q8TB33 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01560Q8TB33 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.05■□□□□ 0.48
LINC01560Q8TB33 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.05■□□□□ 0.48
LINC01560Q8TB33 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
LINC01560Q8TB33 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
LINC01560Q8TB33 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
LINC01560Q8TB33 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
LINC01560Q8TB33 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.05■□□□□ 0.48
LINC01560Q8TB33 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.04■□□□□ 0.48
LINC01560Q8TB33 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC01560Q8TB33 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC01560Q8TB33 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms