Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
SMARCC2Q8TAQ2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC24.44■■□□□ 1.5
SMARCC2Q8TAQ2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
SMARCC2Q8TAQ2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SMARCC2Q8TAQ2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC24.43■■□□□ 1.5
SMARCC2Q8TAQ2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SMARCC2Q8TAQ2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SMARCC2Q8TAQ2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC24.43■■□□□ 1.5
SMARCC2Q8TAQ2 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SMARCC2Q8TAQ2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SMARCC2Q8TAQ2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC24.43■■□□□ 1.5
SMARCC2Q8TAQ2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC24.43■■□□□ 1.5
SMARCC2Q8TAQ2 AC016769.1-201ENST00000409132 1010 ntBASIC24.43■■□□□ 1.5
SMARCC2Q8TAQ2 DBI-210ENST00000542275 757 ntTSL 5 BASIC24.43■■□□□ 1.5
SMARCC2Q8TAQ2 AC053503.5-201ENST00000601508 636 ntBASIC24.43■■□□□ 1.5
SMARCC2Q8TAQ2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
SMARCC2Q8TAQ2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SMARCC2Q8TAQ2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SMARCC2Q8TAQ2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SMARCC2Q8TAQ2 AC004911.1-201ENST00000416316 871 ntBASIC24.42■■□□□ 1.5
SMARCC2Q8TAQ2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC24.42■■□□□ 1.5
SMARCC2Q8TAQ2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC24.42■■□□□ 1.5
SMARCC2Q8TAQ2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SMARCC2Q8TAQ2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
SMARCC2Q8TAQ2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
SMARCC2Q8TAQ2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC24.42■■□□□ 1.5
SMARCC2Q8TAQ2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SMARCC2Q8TAQ2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SMARCC2Q8TAQ2 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC24.41■■□□□ 1.5
SMARCC2Q8TAQ2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
SMARCC2Q8TAQ2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC24.41■■□□□ 1.5
SMARCC2Q8TAQ2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SMARCC2Q8TAQ2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC24.41■■□□□ 1.5
SMARCC2Q8TAQ2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC24.41■■□□□ 1.5
SMARCC2Q8TAQ2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SMARCC2Q8TAQ2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SMARCC2Q8TAQ2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
SMARCC2Q8TAQ2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
SMARCC2Q8TAQ2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SMARCC2Q8TAQ2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
SMARCC2Q8TAQ2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SMARCC2Q8TAQ2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
SMARCC2Q8TAQ2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
SMARCC2Q8TAQ2 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SMARCC2Q8TAQ2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC24.4■■□□□ 1.5
SMARCC2Q8TAQ2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SMARCC2Q8TAQ2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC24.4■■□□□ 1.5
SMARCC2Q8TAQ2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SMARCC2Q8TAQ2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SMARCC2Q8TAQ2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC24.4■■□□□ 1.5
SMARCC2Q8TAQ2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC24.4■■□□□ 1.5
SMARCC2Q8TAQ2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SMARCC2Q8TAQ2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SMARCC2Q8TAQ2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SMARCC2Q8TAQ2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC24.4■■□□□ 1.5
SMARCC2Q8TAQ2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC24.4■■□□□ 1.5
SMARCC2Q8TAQ2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC24.4■■□□□ 1.5
SMARCC2Q8TAQ2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
SMARCC2Q8TAQ2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
SMARCC2Q8TAQ2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
SMARCC2Q8TAQ2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SMARCC2Q8TAQ2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SMARCC2Q8TAQ2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SMARCC2Q8TAQ2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC24.39■■□□□ 1.49
SMARCC2Q8TAQ2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.39■■□□□ 1.49
SMARCC2Q8TAQ2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC24.39■■□□□ 1.49
SMARCC2Q8TAQ2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.39■■□□□ 1.49
SMARCC2Q8TAQ2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC24.39■■□□□ 1.49
SMARCC2Q8TAQ2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC24.39■■□□□ 1.49
SMARCC2Q8TAQ2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SMARCC2Q8TAQ2 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC24.39■■□□□ 1.49
SMARCC2Q8TAQ2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
SMARCC2Q8TAQ2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SMARCC2Q8TAQ2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SMARCC2Q8TAQ2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SMARCC2Q8TAQ2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC24.38■■□□□ 1.49
SMARCC2Q8TAQ2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC24.38■■□□□ 1.49
SMARCC2Q8TAQ2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC24.38■■□□□ 1.49
SMARCC2Q8TAQ2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SMARCC2Q8TAQ2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SMARCC2Q8TAQ2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SMARCC2Q8TAQ2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
SMARCC2Q8TAQ2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
SMARCC2Q8TAQ2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC24.38■■□□□ 1.49
SMARCC2Q8TAQ2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
SMARCC2Q8TAQ2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
SMARCC2Q8TAQ2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SMARCC2Q8TAQ2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SMARCC2Q8TAQ2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SMARCC2Q8TAQ2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SMARCC2Q8TAQ2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
SMARCC2Q8TAQ2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SMARCC2Q8TAQ2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC24.37■■□□□ 1.49
SMARCC2Q8TAQ2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
SMARCC2Q8TAQ2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
SMARCC2Q8TAQ2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
SMARCC2Q8TAQ2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC24.37■■□□□ 1.49
SMARCC2Q8TAQ2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC24.37■■□□□ 1.49
SMARCC2Q8TAQ2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC24.37■■□□□ 1.49
SMARCC2Q8TAQ2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms