Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH19Q8TAB3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
PCDH19Q8TAB3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDH19Q8TAB3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH19Q8TAB3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH19Q8TAB3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
PCDH19Q8TAB3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH19Q8TAB3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
PCDH19Q8TAB3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH19Q8TAB3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH19Q8TAB3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.53■■□□□ 1.04
PCDH19Q8TAB3 AP001160.3-201ENST00000601484 763 ntBASIC21.53■■□□□ 1.04
PCDH19Q8TAB3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH19Q8TAB3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDH19Q8TAB3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.53■■□□□ 1.04
PCDH19Q8TAB3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PCDH19Q8TAB3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH19Q8TAB3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH19Q8TAB3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH19Q8TAB3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH19Q8TAB3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH19Q8TAB3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH19Q8TAB3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
PCDH19Q8TAB3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.52■■□□□ 1.04
PCDH19Q8TAB3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH19Q8TAB3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH19Q8TAB3 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.52■■□□□ 1.04
PCDH19Q8TAB3 AC022517.1-201ENST00000592429 346 ntBASIC21.52■■□□□ 1.04
PCDH19Q8TAB3 IKBKGP1-201ENST00000612193 1073 ntBASIC21.52■■□□□ 1.04
PCDH19Q8TAB3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH19Q8TAB3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
PCDH19Q8TAB3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH19Q8TAB3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
PCDH19Q8TAB3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
PCDH19Q8TAB3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH19Q8TAB3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDH19Q8TAB3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDH19Q8TAB3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
PCDH19Q8TAB3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH19Q8TAB3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDH19Q8TAB3 SLC7A5P2-201ENST00000553010 536 ntBASIC21.51■■□□□ 1.03
PCDH19Q8TAB3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDH19Q8TAB3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH19Q8TAB3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH19Q8TAB3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH19Q8TAB3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH19Q8TAB3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PCDH19Q8TAB3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH19Q8TAB3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH19Q8TAB3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH19Q8TAB3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH19Q8TAB3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH19Q8TAB3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH19Q8TAB3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PCDH19Q8TAB3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDH19Q8TAB3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDH19Q8TAB3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PCDH19Q8TAB3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH19Q8TAB3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH19Q8TAB3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
PCDH19Q8TAB3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH19Q8TAB3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH19Q8TAB3 AC121338.2-201ENST00000622535 1744 ntBASIC21.49■■□□□ 1.03
PCDH19Q8TAB3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH19Q8TAB3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH19Q8TAB3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH19Q8TAB3 KRT16P2-201ENST00000414673 1423 ntBASIC21.49■■□□□ 1.03
PCDH19Q8TAB3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH19Q8TAB3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH19Q8TAB3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH19Q8TAB3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH19Q8TAB3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH19Q8TAB3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.49■■□□□ 1.03
PCDH19Q8TAB3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.49■■□□□ 1.03
PCDH19Q8TAB3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH19Q8TAB3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDH19Q8TAB3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
PCDH19Q8TAB3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
PCDH19Q8TAB3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH19Q8TAB3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH19Q8TAB3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
PCDH19Q8TAB3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH19Q8TAB3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDH19Q8TAB3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDH19Q8TAB3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDH19Q8TAB3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH19Q8TAB3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH19Q8TAB3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH19Q8TAB3 AC006128.1-201ENST00000624704 1661 ntBASIC21.48■■□□□ 1.03
PCDH19Q8TAB3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
PCDH19Q8TAB3 RARRES2P11-201ENST00000635158 484 ntBASIC21.48■■□□□ 1.03
PCDH19Q8TAB3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH19Q8TAB3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH19Q8TAB3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
PCDH19Q8TAB3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH19Q8TAB3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDH19Q8TAB3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH19Q8TAB3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDH19Q8TAB3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH19Q8TAB3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms