Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.3■□□□□ 0.2
LINC01006Q8NI28 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01006Q8NI28 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
LINC01006Q8NI28 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01006Q8NI28 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.29■□□□□ 0.2
LINC01006Q8NI28 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
LINC01006Q8NI28 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01006Q8NI28 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
LINC01006Q8NI28 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01006Q8NI28 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01006Q8NI28 AL596275.1-201ENST00000423464 877 ntBASIC16.29■□□□□ 0.2
LINC01006Q8NI28 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.29■□□□□ 0.2
LINC01006Q8NI28 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.29■□□□□ 0.2
LINC01006Q8NI28 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
LINC01006Q8NI28 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.29■□□□□ 0.2
LINC01006Q8NI28 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.29■□□□□ 0.2
LINC01006Q8NI28 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
LINC01006Q8NI28 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LINC01006Q8NI28 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.29■□□□□ 0.2
LINC01006Q8NI28 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01006Q8NI28 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01006Q8NI28 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01006Q8NI28 FAM99A-202ENST00000538190 1989 ntBASIC16.29■□□□□ 0.2
LINC01006Q8NI28 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.29■□□□□ 0.2
LINC01006Q8NI28 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01006Q8NI28 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
LINC01006Q8NI28 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01006Q8NI28 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01006Q8NI28 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.29■□□□□ 0.2
LINC01006Q8NI28 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01006Q8NI28 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.28■□□□□ 0.2
LINC01006Q8NI28 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.28■□□□□ 0.2
LINC01006Q8NI28 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01006Q8NI28 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01006Q8NI28 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01006Q8NI28 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01006Q8NI28 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.28■□□□□ 0.2
LINC01006Q8NI28 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.28■□□□□ 0.2
LINC01006Q8NI28 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LINC01006Q8NI28 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.28■□□□□ 0.2
LINC01006Q8NI28 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.28■□□□□ 0.2
LINC01006Q8NI28 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01006Q8NI28 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.28■□□□□ 0.2
LINC01006Q8NI28 PNMA6B-201ENST00000538162 1200 ntBASIC16.28■□□□□ 0.2
LINC01006Q8NI28 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.28■□□□□ 0.2
LINC01006Q8NI28 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.28■□□□□ 0.2
LINC01006Q8NI28 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.28■□□□□ 0.2
LINC01006Q8NI28 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01006Q8NI28 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01006Q8NI28 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01006Q8NI28 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01006Q8NI28 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01006Q8NI28 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LINC01006Q8NI28 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.28■□□□□ 0.2
LINC01006Q8NI28 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01006Q8NI28 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC16.28■□□□□ 0.2
LINC01006Q8NI28 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.27■□□□□ 0.2
LINC01006Q8NI28 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC01006Q8NI28 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC01006Q8NI28 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LINC01006Q8NI28 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
LINC01006Q8NI28 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
LINC01006Q8NI28 UBE2SP1-201ENST00000450587 669 ntBASIC16.27■□□□□ 0.2
LINC01006Q8NI28 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.27■□□□□ 0.2
LINC01006Q8NI28 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LINC01006Q8NI28 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.27■□□□□ 0.2
LINC01006Q8NI28 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
LINC01006Q8NI28 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.27■□□□□ 0.2
LINC01006Q8NI28 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.27■□□□□ 0.2
LINC01006Q8NI28 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
LINC01006Q8NI28 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC01006Q8NI28 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.27■□□□□ 0.19
LINC01006Q8NI28 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LINC01006Q8NI28 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC16.26■□□□□ 0.19
LINC01006Q8NI28 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01006Q8NI28 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01006Q8NI28 AC092368.3-202ENST00000574180 1591 ntBASIC16.26■□□□□ 0.19
LINC01006Q8NI28 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01006Q8NI28 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01006Q8NI28 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.26■□□□□ 0.19
LINC01006Q8NI28 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
LINC01006Q8NI28 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01006Q8NI28 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.26■□□□□ 0.19
LINC01006Q8NI28 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.26■□□□□ 0.19
LINC01006Q8NI28 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.26■□□□□ 0.19
LINC01006Q8NI28 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.26■□□□□ 0.19
LINC01006Q8NI28 AL359736.2-201ENST00000621992 437 ntBASIC16.26■□□□□ 0.19
LINC01006Q8NI28 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC16.26■□□□□ 0.19
LINC01006Q8NI28 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LINC01006Q8NI28 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01006Q8NI28 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LINC01006Q8NI28 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01006Q8NI28 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01006Q8NI28 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC01006Q8NI28 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.25■□□□□ 0.19
LINC01006Q8NI28 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC16.25■□□□□ 0.19
LINC01006Q8NI28 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LINC01006Q8NI28 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.25■□□□□ 0.19
LINC01006Q8NI28 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.25■□□□□ 0.19
LINC01006Q8NI28 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms