Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
NUP43Q8NFH3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NUP43Q8NFH3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
NUP43Q8NFH3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUP43Q8NFH3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NUP43Q8NFH3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NUP43Q8NFH3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUP43Q8NFH3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUP43Q8NFH3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NUP43Q8NFH3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUP43Q8NFH3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.48■□□□□ 0.71
NUP43Q8NFH3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.48■□□□□ 0.71
NUP43Q8NFH3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.48■□□□□ 0.71
NUP43Q8NFH3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUP43Q8NFH3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.48■□□□□ 0.71
NUP43Q8NFH3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUP43Q8NFH3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.48■□□□□ 0.71
NUP43Q8NFH3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUP43Q8NFH3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUP43Q8NFH3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NUP43Q8NFH3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NUP43Q8NFH3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NUP43Q8NFH3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
NUP43Q8NFH3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NUP43Q8NFH3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
NUP43Q8NFH3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
NUP43Q8NFH3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.47■□□□□ 0.71
NUP43Q8NFH3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.47■□□□□ 0.71
NUP43Q8NFH3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.47■□□□□ 0.71
NUP43Q8NFH3 AC010141.2-201ENST00000452426 721 ntBASIC19.47■□□□□ 0.71
NUP43Q8NFH3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.47■□□□□ 0.71
NUP43Q8NFH3 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.47■□□□□ 0.71
NUP43Q8NFH3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.47■□□□□ 0.71
NUP43Q8NFH3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.47■□□□□ 0.71
NUP43Q8NFH3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
NUP43Q8NFH3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
NUP43Q8NFH3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NUP43Q8NFH3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NUP43Q8NFH3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NUP43Q8NFH3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NUP43Q8NFH3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
NUP43Q8NFH3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NUP43Q8NFH3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NUP43Q8NFH3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NUP43Q8NFH3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NUP43Q8NFH3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NUP43Q8NFH3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.46■□□□□ 0.71
NUP43Q8NFH3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NUP43Q8NFH3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.46■□□□□ 0.71
NUP43Q8NFH3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
NUP43Q8NFH3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NUP43Q8NFH3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
NUP43Q8NFH3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NUP43Q8NFH3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.46■□□□□ 0.71
NUP43Q8NFH3 DUX4L2-201ENST00000561772 1275 ntBASIC19.46■□□□□ 0.71
NUP43Q8NFH3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.46■□□□□ 0.71
NUP43Q8NFH3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
NUP43Q8NFH3 AC120498.10-201ENST00000621827 505 ntBASIC19.46■□□□□ 0.71
NUP43Q8NFH3 DUX4L6-201ENST00000626483 1275 ntBASIC19.46■□□□□ 0.71
NUP43Q8NFH3 DUX4L1-201ENST00000627662 1275 ntBASIC19.46■□□□□ 0.71
NUP43Q8NFH3 DUX4L8-201ENST00000629013 1275 ntBASIC19.46■□□□□ 0.71
NUP43Q8NFH3 DUX4L3-201ENST00000630187 1275 ntBASIC19.46■□□□□ 0.71
NUP43Q8NFH3 DUX4L7-201ENST00000630678 1275 ntBASIC19.46■□□□□ 0.71
NUP43Q8NFH3 DUX4L5-201ENST00000630834 1275 ntBASIC19.46■□□□□ 0.71
NUP43Q8NFH3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.46■□□□□ 0.71
NUP43Q8NFH3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NUP43Q8NFH3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.46■□□□□ 0.71
NUP43Q8NFH3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.46■□□□□ 0.71
NUP43Q8NFH3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
NUP43Q8NFH3 AC121338.2-201ENST00000622535 1744 ntBASIC19.45■□□□□ 0.7
NUP43Q8NFH3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUP43Q8NFH3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NUP43Q8NFH3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NUP43Q8NFH3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
NUP43Q8NFH3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.45■□□□□ 0.7
NUP43Q8NFH3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.45■□□□□ 0.7
NUP43Q8NFH3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUP43Q8NFH3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.45■□□□□ 0.7
NUP43Q8NFH3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
NUP43Q8NFH3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUP43Q8NFH3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NUP43Q8NFH3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.45■□□□□ 0.7
NUP43Q8NFH3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.45■□□□□ 0.7
NUP43Q8NFH3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NUP43Q8NFH3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.45■□□□□ 0.7
NUP43Q8NFH3 AP001160.3-201ENST00000601484 763 ntBASIC19.45■□□□□ 0.7
NUP43Q8NFH3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUP43Q8NFH3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUP43Q8NFH3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUP43Q8NFH3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
NUP43Q8NFH3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.45■□□□□ 0.7
NUP43Q8NFH3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
NUP43Q8NFH3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUP43Q8NFH3 PLK5-205ENST00000642079 1969 ntBASIC19.44■□□□□ 0.7
NUP43Q8NFH3 AC004854.2-201ENST00000608450 1441 ntBASIC19.44■□□□□ 0.7
NUP43Q8NFH3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUP43Q8NFH3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NUP43Q8NFH3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUP43Q8NFH3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUP43Q8NFH3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms