Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SMRP1Q8NCR6 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
SMRP1Q8NCR6 MTDHP1-201ENST00000605323 784 ntBASIC21.74■■□□□ 1.07
SMRP1Q8NCR6 AP001412.1-201ENST00000608405 714 ntBASIC21.74■■□□□ 1.07
SMRP1Q8NCR6 AC097493.4-201ENST00000641197 219 ntBASIC21.74■■□□□ 1.07
SMRP1Q8NCR6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.74■■□□□ 1.07
SMRP1Q8NCR6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.74■■□□□ 1.07
SMRP1Q8NCR6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMRP1Q8NCR6 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMRP1Q8NCR6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SMRP1Q8NCR6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMRP1Q8NCR6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SMRP1Q8NCR6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SMRP1Q8NCR6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMRP1Q8NCR6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMRP1Q8NCR6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SMRP1Q8NCR6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SMRP1Q8NCR6 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.73■■□□□ 1.07
SMRP1Q8NCR6 AC133681.1-201ENST00000465482 601 ntBASIC21.73■■□□□ 1.07
SMRP1Q8NCR6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SMRP1Q8NCR6 MIR4785-201ENST00000585005 73 ntBASIC21.73■■□□□ 1.07
SMRP1Q8NCR6 AC124016.1-201ENST00000609552 612 ntBASIC21.73■■□□□ 1.07
SMRP1Q8NCR6 AC139530.1-201ENST00000575312 1977 ntBASIC21.73■■□□□ 1.07
SMRP1Q8NCR6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMRP1Q8NCR6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMRP1Q8NCR6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.73■■□□□ 1.07
SMRP1Q8NCR6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMRP1Q8NCR6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMRP1Q8NCR6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.73■■□□□ 1.07
SMRP1Q8NCR6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMRP1Q8NCR6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMRP1Q8NCR6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.72■■□□□ 1.07
SMRP1Q8NCR6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.72■■□□□ 1.07
SMRP1Q8NCR6 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMRP1Q8NCR6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
SMRP1Q8NCR6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SMRP1Q8NCR6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMRP1Q8NCR6 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SMRP1Q8NCR6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SMRP1Q8NCR6 AC012306.2-201ENST00000609350 630 ntBASIC21.72■■□□□ 1.07
SMRP1Q8NCR6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.72■■□□□ 1.07
SMRP1Q8NCR6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMRP1Q8NCR6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMRP1Q8NCR6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMRP1Q8NCR6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMRP1Q8NCR6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SMRP1Q8NCR6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMRP1Q8NCR6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
SMRP1Q8NCR6 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SMRP1Q8NCR6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMRP1Q8NCR6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMRP1Q8NCR6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SMRP1Q8NCR6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SMRP1Q8NCR6 RCN1P1-201ENST00000400413 996 ntBASIC21.71■■□□□ 1.07
SMRP1Q8NCR6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SMRP1Q8NCR6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.71■■□□□ 1.07
SMRP1Q8NCR6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.71■■□□□ 1.07
SMRP1Q8NCR6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
SMRP1Q8NCR6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.71■■□□□ 1.07
SMRP1Q8NCR6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SMRP1Q8NCR6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMRP1Q8NCR6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMRP1Q8NCR6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SMRP1Q8NCR6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SMRP1Q8NCR6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMRP1Q8NCR6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SMRP1Q8NCR6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMRP1Q8NCR6 AL135905.2-201ENST00000584934 1404 ntBASIC21.71■■□□□ 1.07
SMRP1Q8NCR6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SMRP1Q8NCR6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
SMRP1Q8NCR6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMRP1Q8NCR6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SMRP1Q8NCR6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.7■■□□□ 1.06
SMRP1Q8NCR6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.7■■□□□ 1.06
SMRP1Q8NCR6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SMRP1Q8NCR6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMRP1Q8NCR6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.7■■□□□ 1.06
SMRP1Q8NCR6 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.7■■□□□ 1.06
SMRP1Q8NCR6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SMRP1Q8NCR6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.7■■□□□ 1.06
SMRP1Q8NCR6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMRP1Q8NCR6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMRP1Q8NCR6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMRP1Q8NCR6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMRP1Q8NCR6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SMRP1Q8NCR6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMRP1Q8NCR6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.69■■□□□ 1.06
SMRP1Q8NCR6 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SMRP1Q8NCR6 AC007322.3-201ENST00000426526 701 ntBASIC21.69■■□□□ 1.06
SMRP1Q8NCR6 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.69■■□□□ 1.06
SMRP1Q8NCR6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.69■■□□□ 1.06
SMRP1Q8NCR6 TSPY15P-201ENST00000457163 923 ntBASIC21.69■■□□□ 1.06
SMRP1Q8NCR6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SMRP1Q8NCR6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.69■■□□□ 1.06
SMRP1Q8NCR6 AC105020.6-201ENST00000621523 1217 ntBASIC21.69■■□□□ 1.06
SMRP1Q8NCR6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.69■■□□□ 1.06
SMRP1Q8NCR6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SMRP1Q8NCR6 CYP21A1P-202ENST00000354927 1481 ntBASIC21.69■■□□□ 1.06
SMRP1Q8NCR6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMRP1Q8NCR6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms