Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM116Q8NCL8 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM116Q8NCL8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TMEM116Q8NCL8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM116Q8NCL8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM116Q8NCL8 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
TMEM116Q8NCL8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TMEM116Q8NCL8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM116Q8NCL8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM116Q8NCL8 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.45■□□□□ 0.22
TMEM116Q8NCL8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.45■□□□□ 0.22
TMEM116Q8NCL8 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM116Q8NCL8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.44■□□□□ 0.22
TMEM116Q8NCL8 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.44■□□□□ 0.22
TMEM116Q8NCL8 RNF165-205ENST00000588679 2904 ntBASIC16.44■□□□□ 0.22
TMEM116Q8NCL8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM116Q8NCL8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
TMEM116Q8NCL8 RASA4CP-201ENST00000424092 1398 ntBASIC16.44■□□□□ 0.22
TMEM116Q8NCL8 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM116Q8NCL8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM116Q8NCL8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM116Q8NCL8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.44■□□□□ 0.22
TMEM116Q8NCL8 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.44■□□□□ 0.22
TMEM116Q8NCL8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.44■□□□□ 0.22
TMEM116Q8NCL8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM116Q8NCL8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM116Q8NCL8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM116Q8NCL8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM116Q8NCL8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM116Q8NCL8 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TMEM116Q8NCL8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM116Q8NCL8 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.43■□□□□ 0.22
TMEM116Q8NCL8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.43■□□□□ 0.22
TMEM116Q8NCL8 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM116Q8NCL8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TMEM116Q8NCL8 AL157384.1-201ENST00000445995 2473 ntBASIC16.43■□□□□ 0.22
TMEM116Q8NCL8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
TMEM116Q8NCL8 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM116Q8NCL8 AC055733.4-201ENST00000638462 1354 ntBASIC16.43■□□□□ 0.22
TMEM116Q8NCL8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
TMEM116Q8NCL8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM116Q8NCL8 MIR939-201ENST00000401314 82 ntBASIC16.43■□□□□ 0.22
TMEM116Q8NCL8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TMEM116Q8NCL8 AC091305.1-201ENST00000479476 895 ntBASIC16.43■□□□□ 0.22
TMEM116Q8NCL8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TMEM116Q8NCL8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM116Q8NCL8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TMEM116Q8NCL8 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM116Q8NCL8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TMEM116Q8NCL8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM116Q8NCL8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM116Q8NCL8 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.43■□□□□ 0.22
TMEM116Q8NCL8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TMEM116Q8NCL8 TSPY26P-201ENST00000476365 1326 ntBASIC16.43■□□□□ 0.22
TMEM116Q8NCL8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM116Q8NCL8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.42■□□□□ 0.22
TMEM116Q8NCL8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM116Q8NCL8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
TMEM116Q8NCL8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.42■□□□□ 0.22
TMEM116Q8NCL8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.42■□□□□ 0.22
TMEM116Q8NCL8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM116Q8NCL8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM116Q8NCL8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.42■□□□□ 0.22
TMEM116Q8NCL8 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TMEM116Q8NCL8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.42■□□□□ 0.22
TMEM116Q8NCL8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.42■□□□□ 0.22
TMEM116Q8NCL8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.42■□□□□ 0.22
TMEM116Q8NCL8 AL136967.2-201ENST00000623968 743 ntBASIC16.42■□□□□ 0.22
TMEM116Q8NCL8 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM116Q8NCL8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM116Q8NCL8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM116Q8NCL8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TMEM116Q8NCL8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TMEM116Q8NCL8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.42■□□□□ 0.22
TMEM116Q8NCL8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM116Q8NCL8 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM116Q8NCL8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.42■□□□□ 0.22
TMEM116Q8NCL8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TMEM116Q8NCL8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TMEM116Q8NCL8 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM116Q8NCL8 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.41■□□□□ 0.22
TMEM116Q8NCL8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEM116Q8NCL8 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TMEM116Q8NCL8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM116Q8NCL8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.41■□□□□ 0.22
TMEM116Q8NCL8 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM116Q8NCL8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM116Q8NCL8 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.41■□□□□ 0.22
TMEM116Q8NCL8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM116Q8NCL8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM116Q8NCL8 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.41■□□□□ 0.22
TMEM116Q8NCL8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TMEM116Q8NCL8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.41■□□□□ 0.22
TMEM116Q8NCL8 AC142381.2-201ENST00000566120 298 ntBASIC16.41■□□□□ 0.22
TMEM116Q8NCL8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM116Q8NCL8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM116Q8NCL8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM116Q8NCL8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM116Q8NCL8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM116Q8NCL8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms