Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC22.57■■□□□ 1.2
VPS52Q8N1B4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC22.57■■□□□ 1.2
VPS52Q8N1B4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.57■■□□□ 1.2
VPS52Q8N1B4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VPS52Q8N1B4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.57■■□□□ 1.2
VPS52Q8N1B4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
VPS52Q8N1B4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
VPS52Q8N1B4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
VPS52Q8N1B4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VPS52Q8N1B4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS52Q8N1B4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS52Q8N1B4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
VPS52Q8N1B4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS52Q8N1B4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.56■■□□□ 1.2
VPS52Q8N1B4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.56■■□□□ 1.2
VPS52Q8N1B4 AC008687.6-201ENST00000596318 630 ntBASIC22.56■■□□□ 1.2
VPS52Q8N1B4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.56■■□□□ 1.2
VPS52Q8N1B4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
VPS52Q8N1B4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
VPS52Q8N1B4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS52Q8N1B4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS52Q8N1B4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS52Q8N1B4 AC139530.1-201ENST00000575312 1977 ntBASIC22.56■■□□□ 1.2
VPS52Q8N1B4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS52Q8N1B4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
VPS52Q8N1B4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.55■■□□□ 1.2
VPS52Q8N1B4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
VPS52Q8N1B4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.55■■□□□ 1.2
VPS52Q8N1B4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.55■■□□□ 1.2
VPS52Q8N1B4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.55■■□□□ 1.2
VPS52Q8N1B4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
VPS52Q8N1B4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
VPS52Q8N1B4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
VPS52Q8N1B4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
VPS52Q8N1B4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
VPS52Q8N1B4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC22.54■■□□□ 1.2
VPS52Q8N1B4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
VPS52Q8N1B4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
VPS52Q8N1B4 KRT18P29-201ENST00000397031 1267 ntBASIC22.54■■□□□ 1.2
VPS52Q8N1B4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
VPS52Q8N1B4 ITM2C-210ENST00000620962 501 ntBASIC22.54■■□□□ 1.2
VPS52Q8N1B4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
VPS52Q8N1B4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
VPS52Q8N1B4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
VPS52Q8N1B4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
VPS52Q8N1B4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
VPS52Q8N1B4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
VPS52Q8N1B4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS52Q8N1B4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS52Q8N1B4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS52Q8N1B4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS52Q8N1B4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
VPS52Q8N1B4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC22.53■■□□□ 1.2
VPS52Q8N1B4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.53■■□□□ 1.2
VPS52Q8N1B4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC22.53■■□□□ 1.2
VPS52Q8N1B4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.53■■□□□ 1.2
VPS52Q8N1B4 KRT16P2-201ENST00000414673 1423 ntBASIC22.53■■□□□ 1.2
VPS52Q8N1B4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC22.53■■□□□ 1.2
VPS52Q8N1B4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS52Q8N1B4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS52Q8N1B4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.53■■□□□ 1.2
VPS52Q8N1B4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS52Q8N1B4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.53■■□□□ 1.2
VPS52Q8N1B4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS52Q8N1B4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
VPS52Q8N1B4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
VPS52Q8N1B4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
VPS52Q8N1B4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.52■■□□□ 1.2
VPS52Q8N1B4 RBM17P2-201ENST00000616397 1405 ntBASIC22.52■■□□□ 1.2
VPS52Q8N1B4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
VPS52Q8N1B4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
VPS52Q8N1B4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
VPS52Q8N1B4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.52■■□□□ 1.2
VPS52Q8N1B4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
VPS52Q8N1B4 AL591742.1-201ENST00000604433 565 ntBASIC22.52■■□□□ 1.2
VPS52Q8N1B4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC22.52■■□□□ 1.2
VPS52Q8N1B4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
VPS52Q8N1B4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
VPS52Q8N1B4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
VPS52Q8N1B4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.52■■□□□ 1.2
VPS52Q8N1B4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC22.52■■□□□ 1.2
VPS52Q8N1B4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
VPS52Q8N1B4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC22.52■■□□□ 1.19
VPS52Q8N1B4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
VPS52Q8N1B4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
VPS52Q8N1B4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.51■■□□□ 1.19
VPS52Q8N1B4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.51■■□□□ 1.19
VPS52Q8N1B4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.51■■□□□ 1.19
VPS52Q8N1B4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
VPS52Q8N1B4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
VPS52Q8N1B4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
VPS52Q8N1B4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
VPS52Q8N1B4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC22.51■■□□□ 1.19
VPS52Q8N1B4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC22.51■■□□□ 1.19
VPS52Q8N1B4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
VPS52Q8N1B4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
VPS52Q8N1B4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
VPS52Q8N1B4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC22.51■■□□□ 1.19
VPS52Q8N1B4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
VPS52Q8N1B4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms