Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.4■■□□□ 1.02
SIX5Q8N196 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SIX5Q8N196 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SIX5Q8N196 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
SIX5Q8N196 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.39■■□□□ 1.02
SIX5Q8N196 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SIX5Q8N196 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SIX5Q8N196 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SIX5Q8N196 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SIX5Q8N196 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SIX5Q8N196 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.39■■□□□ 1.01
SIX5Q8N196 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
SIX5Q8N196 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
SIX5Q8N196 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SIX5Q8N196 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.39■■□□□ 1.01
SIX5Q8N196 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
SIX5Q8N196 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SIX5Q8N196 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SIX5Q8N196 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SIX5Q8N196 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
SIX5Q8N196 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SIX5Q8N196 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SIX5Q8N196 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SIX5Q8N196 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.38■■□□□ 1.01
SIX5Q8N196 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SIX5Q8N196 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.38■■□□□ 1.01
SIX5Q8N196 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.38■■□□□ 1.01
SIX5Q8N196 CDV3P1-201ENST00000471403 739 ntBASIC21.38■■□□□ 1.01
SIX5Q8N196 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.38■■□□□ 1.01
SIX5Q8N196 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SIX5Q8N196 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.38■■□□□ 1.01
SIX5Q8N196 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.38■■□□□ 1.01
SIX5Q8N196 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.37■■□□□ 1.01
SIX5Q8N196 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SIX5Q8N196 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.37■■□□□ 1.01
SIX5Q8N196 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SIX5Q8N196 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SIX5Q8N196 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.37■■□□□ 1.01
SIX5Q8N196 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SIX5Q8N196 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.37■■□□□ 1.01
SIX5Q8N196 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
SIX5Q8N196 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SIX5Q8N196 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SIX5Q8N196 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.37■■□□□ 1.01
SIX5Q8N196 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.36■■□□□ 1.01
SIX5Q8N196 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
SIX5Q8N196 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SIX5Q8N196 AC091799.1-201ENST00000422823 811 ntBASIC21.36■■□□□ 1.01
SIX5Q8N196 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SIX5Q8N196 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.36■■□□□ 1.01
SIX5Q8N196 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.36■■□□□ 1.01
SIX5Q8N196 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SIX5Q8N196 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.36■■□□□ 1.01
SIX5Q8N196 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.36■■□□□ 1.01
SIX5Q8N196 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
SIX5Q8N196 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SIX5Q8N196 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SIX5Q8N196 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SIX5Q8N196 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SIX5Q8N196 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SIX5Q8N196 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SIX5Q8N196 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SIX5Q8N196 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
SIX5Q8N196 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
SIX5Q8N196 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SIX5Q8N196 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SIX5Q8N196 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
SIX5Q8N196 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SIX5Q8N196 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
SIX5Q8N196 MCRIP2P1-201ENST00000394346 511 ntBASIC21.35■■□□□ 1.01
SIX5Q8N196 TSPY7P-201ENST00000431358 1114 ntBASIC21.35■■□□□ 1.01
SIX5Q8N196 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SIX5Q8N196 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.35■■□□□ 1.01
SIX5Q8N196 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.35■■□□□ 1.01
SIX5Q8N196 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.35■■□□□ 1.01
SIX5Q8N196 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SIX5Q8N196 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SIX5Q8N196 AC133561.1-201ENST00000568600 2415 ntBASIC21.35■■□□□ 1.01
SIX5Q8N196 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.34■■□□□ 1.01
SIX5Q8N196 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
SIX5Q8N196 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.34■■□□□ 1.01
SIX5Q8N196 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SIX5Q8N196 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SIX5Q8N196 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
SIX5Q8N196 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SIX5Q8N196 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SIX5Q8N196 KRT17P2-201ENST00000300992 1314 ntBASIC21.33■■□□□ 1.01
SIX5Q8N196 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
SIX5Q8N196 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
SIX5Q8N196 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SIX5Q8N196 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SIX5Q8N196 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.33■■□□□ 1.01
SIX5Q8N196 AC012618.2-201ENST00000428058 849 ntBASIC21.33■■□□□ 1.01
SIX5Q8N196 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.33■■□□□ 1.01
SIX5Q8N196 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.32■■□□□ 1
SIX5Q8N196 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.32■■□□□ 1
SIX5Q8N196 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SIX5Q8N196 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SIX5Q8N196 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SIX5Q8N196 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms