Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LINC00346Q8IVM7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.43■□□□□ 0.54
LINC00346Q8IVM7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LINC00346Q8IVM7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LINC00346Q8IVM7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LINC00346Q8IVM7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LINC00346Q8IVM7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
LINC00346Q8IVM7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
LINC00346Q8IVM7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LINC00346Q8IVM7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINC00346Q8IVM7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.42■□□□□ 0.54
LINC00346Q8IVM7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINC00346Q8IVM7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.42■□□□□ 0.54
LINC00346Q8IVM7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
LINC00346Q8IVM7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
LINC00346Q8IVM7 MIR638-201ENST00000385237 100 ntBASIC18.42■□□□□ 0.54
LINC00346Q8IVM7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LINC00346Q8IVM7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LINC00346Q8IVM7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINC00346Q8IVM7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.42■□□□□ 0.54
LINC00346Q8IVM7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LINC00346Q8IVM7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
LINC00346Q8IVM7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.42■□□□□ 0.54
LINC00346Q8IVM7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINC00346Q8IVM7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINC00346Q8IVM7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINC00346Q8IVM7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
LINC00346Q8IVM7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINC00346Q8IVM7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
LINC00346Q8IVM7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINC00346Q8IVM7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.41■□□□□ 0.54
LINC00346Q8IVM7 EEF1DP3-203ENST00000566025 782 ntBASIC18.41■□□□□ 0.54
LINC00346Q8IVM7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.41■□□□□ 0.54
LINC00346Q8IVM7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.41■□□□□ 0.54
LINC00346Q8IVM7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.41■□□□□ 0.54
LINC00346Q8IVM7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINC00346Q8IVM7 PLK5-205ENST00000642079 1969 ntBASIC18.41■□□□□ 0.54
LINC00346Q8IVM7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC00346Q8IVM7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LINC00346Q8IVM7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LINC00346Q8IVM7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC00346Q8IVM7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LINC00346Q8IVM7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC00346Q8IVM7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.4■□□□□ 0.54
LINC00346Q8IVM7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC00346Q8IVM7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LINC00346Q8IVM7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC00346Q8IVM7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LINC00346Q8IVM7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC00346Q8IVM7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC00346Q8IVM7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LINC00346Q8IVM7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.4■□□□□ 0.54
LINC00346Q8IVM7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC00346Q8IVM7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LINC00346Q8IVM7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC00346Q8IVM7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.4■□□□□ 0.54
LINC00346Q8IVM7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC00346Q8IVM7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.4■□□□□ 0.54
LINC00346Q8IVM7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
LINC00346Q8IVM7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
LINC00346Q8IVM7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
LINC00346Q8IVM7 AC061975.6-201ENST00000579045 1553 ntBASIC18.39■□□□□ 0.53
LINC00346Q8IVM7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LINC00346Q8IVM7 AC079140.4-201ENST00000507448 529 ntBASIC18.39■□□□□ 0.53
LINC00346Q8IVM7 AC053503.5-201ENST00000601508 636 ntBASIC18.39■□□□□ 0.53
LINC00346Q8IVM7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.39■□□□□ 0.53
LINC00346Q8IVM7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LINC00346Q8IVM7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LINC00346Q8IVM7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LINC00346Q8IVM7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LINC00346Q8IVM7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
LINC00346Q8IVM7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
LINC00346Q8IVM7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LINC00346Q8IVM7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LINC00346Q8IVM7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
LINC00346Q8IVM7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.38■□□□□ 0.53
LINC00346Q8IVM7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LINC00346Q8IVM7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LINC00346Q8IVM7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC00346Q8IVM7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LINC00346Q8IVM7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC00346Q8IVM7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LINC00346Q8IVM7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LINC00346Q8IVM7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC00346Q8IVM7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.38■□□□□ 0.53
LINC00346Q8IVM7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC00346Q8IVM7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC00346Q8IVM7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.38■□□□□ 0.53
LINC00346Q8IVM7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LINC00346Q8IVM7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.38■□□□□ 0.53
LINC00346Q8IVM7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LINC00346Q8IVM7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.38■□□□□ 0.53
LINC00346Q8IVM7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC00346Q8IVM7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LINC00346Q8IVM7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LINC00346Q8IVM7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.37■□□□□ 0.53
LINC00346Q8IVM7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC00346Q8IVM7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC00346Q8IVM7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.37■□□□□ 0.53
LINC00346Q8IVM7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms