Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.88■□□□□ 0.93
RAPH1Q70E73 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
RAPH1Q70E73 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.88■□□□□ 0.93
RAPH1Q70E73 AC099791.1-201ENST00000416440 715 ntBASIC20.88■□□□□ 0.93
RAPH1Q70E73 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.88■□□□□ 0.93
RAPH1Q70E73 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAPH1Q70E73 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RAPH1Q70E73 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.88■□□□□ 0.93
RAPH1Q70E73 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.88■□□□□ 0.93
RAPH1Q70E73 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAPH1Q70E73 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.88■□□□□ 0.93
RAPH1Q70E73 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.88■□□□□ 0.93
RAPH1Q70E73 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAPH1Q70E73 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAPH1Q70E73 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RAPH1Q70E73 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAPH1Q70E73 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAPH1Q70E73 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.87■□□□□ 0.93
RAPH1Q70E73 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAPH1Q70E73 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAPH1Q70E73 AC096631.2-201ENST00000436136 790 ntBASIC20.87■□□□□ 0.93
RAPH1Q70E73 PBX2P1-201ENST00000493219 1291 ntBASIC20.87■□□□□ 0.93
RAPH1Q70E73 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.87■□□□□ 0.93
RAPH1Q70E73 AC105233.4-201ENST00000642045 216 ntBASIC20.87■□□□□ 0.93
RAPH1Q70E73 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAPH1Q70E73 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
RAPH1Q70E73 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RAPH1Q70E73 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.87■□□□□ 0.93
RAPH1Q70E73 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAPH1Q70E73 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAPH1Q70E73 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RAPH1Q70E73 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAPH1Q70E73 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.87■□□□□ 0.93
RAPH1Q70E73 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAPH1Q70E73 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAPH1Q70E73 TSPY26P-201ENST00000476365 1326 ntBASIC20.86■□□□□ 0.93
RAPH1Q70E73 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAPH1Q70E73 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.86■□□□□ 0.93
RAPH1Q70E73 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.86■□□□□ 0.93
RAPH1Q70E73 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.86■□□□□ 0.93
RAPH1Q70E73 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAPH1Q70E73 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAPH1Q70E73 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAPH1Q70E73 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAPH1Q70E73 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAPH1Q70E73 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.86■□□□□ 0.93
RAPH1Q70E73 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAPH1Q70E73 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.85■□□□□ 0.93
RAPH1Q70E73 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.85■□□□□ 0.93
RAPH1Q70E73 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RAPH1Q70E73 AC027682.1-201ENST00000562846 899 ntBASIC20.85■□□□□ 0.93
RAPH1Q70E73 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.85■□□□□ 0.93
RAPH1Q70E73 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.85■□□□□ 0.93
RAPH1Q70E73 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAPH1Q70E73 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.85■□□□□ 0.93
RAPH1Q70E73 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAPH1Q70E73 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.85■□□□□ 0.93
RAPH1Q70E73 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAPH1Q70E73 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAPH1Q70E73 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAPH1Q70E73 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAPH1Q70E73 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.85■□□□□ 0.93
RAPH1Q70E73 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAPH1Q70E73 LINC01521-201ENST00000504184 1943 ntBASIC20.84■□□□□ 0.93
RAPH1Q70E73 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAPH1Q70E73 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAPH1Q70E73 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAPH1Q70E73 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.84■□□□□ 0.93
RAPH1Q70E73 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
RAPH1Q70E73 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAPH1Q70E73 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAPH1Q70E73 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.84■□□□□ 0.93
RAPH1Q70E73 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAPH1Q70E73 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.84■□□□□ 0.93
RAPH1Q70E73 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.84■□□□□ 0.93
RAPH1Q70E73 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAPH1Q70E73 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAPH1Q70E73 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAPH1Q70E73 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.84■□□□□ 0.93
RAPH1Q70E73 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAPH1Q70E73 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
RAPH1Q70E73 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
RAPH1Q70E73 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAPH1Q70E73 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
RAPH1Q70E73 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.83■□□□□ 0.93
RAPH1Q70E73 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAPH1Q70E73 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAPH1Q70E73 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAPH1Q70E73 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAPH1Q70E73 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RAPH1Q70E73 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAPH1Q70E73 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAPH1Q70E73 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RAPH1Q70E73 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.83■□□□□ 0.93
RAPH1Q70E73 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.83■□□□□ 0.93
RAPH1Q70E73 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.83■□□□□ 0.93
RAPH1Q70E73 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RAPH1Q70E73 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.83■□□□□ 0.93
RAPH1Q70E73 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAPH1Q70E73 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms