Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NHLRC1Q6VVB1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.7■□□□□ 0.58
NHLRC1Q6VVB1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NHLRC1Q6VVB1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NHLRC1Q6VVB1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NHLRC1Q6VVB1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NHLRC1Q6VVB1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.7■□□□□ 0.58
NHLRC1Q6VVB1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.7■□□□□ 0.58
NHLRC1Q6VVB1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NHLRC1Q6VVB1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NHLRC1Q6VVB1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.7■□□□□ 0.58
NHLRC1Q6VVB1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.7■□□□□ 0.58
NHLRC1Q6VVB1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.7■□□□□ 0.58
NHLRC1Q6VVB1 AC061975.6-201ENST00000579045 1553 ntBASIC18.7■□□□□ 0.58
NHLRC1Q6VVB1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NHLRC1Q6VVB1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NHLRC1Q6VVB1 MIR6821-201ENST00000617625 74 ntBASIC18.7■□□□□ 0.58
NHLRC1Q6VVB1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NHLRC1Q6VVB1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.7■□□□□ 0.58
NHLRC1Q6VVB1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NHLRC1Q6VVB1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NHLRC1Q6VVB1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.7■□□□□ 0.58
NHLRC1Q6VVB1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NHLRC1Q6VVB1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NHLRC1Q6VVB1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NHLRC1Q6VVB1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
NHLRC1Q6VVB1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
NHLRC1Q6VVB1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.69■□□□□ 0.58
NHLRC1Q6VVB1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NHLRC1Q6VVB1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.69■□□□□ 0.58
NHLRC1Q6VVB1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.69■□□□□ 0.58
NHLRC1Q6VVB1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.69■□□□□ 0.58
NHLRC1Q6VVB1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.69■□□□□ 0.58
NHLRC1Q6VVB1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.69■□□□□ 0.58
NHLRC1Q6VVB1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.69■□□□□ 0.58
NHLRC1Q6VVB1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
NHLRC1Q6VVB1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NHLRC1Q6VVB1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
NHLRC1Q6VVB1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NHLRC1Q6VVB1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NHLRC1Q6VVB1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.68■□□□□ 0.58
NHLRC1Q6VVB1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NHLRC1Q6VVB1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NHLRC1Q6VVB1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NHLRC1Q6VVB1 AC026271.2-201ENST00000428091 497 ntBASIC18.68■□□□□ 0.58
NHLRC1Q6VVB1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.68■□□□□ 0.58
NHLRC1Q6VVB1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.68■□□□□ 0.58
NHLRC1Q6VVB1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.68■□□□□ 0.58
NHLRC1Q6VVB1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
NHLRC1Q6VVB1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NHLRC1Q6VVB1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NHLRC1Q6VVB1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.68■□□□□ 0.58
NHLRC1Q6VVB1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.68■□□□□ 0.58
NHLRC1Q6VVB1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.68■□□□□ 0.58
NHLRC1Q6VVB1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NHLRC1Q6VVB1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.67■□□□□ 0.58
NHLRC1Q6VVB1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
NHLRC1Q6VVB1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NHLRC1Q6VVB1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NHLRC1Q6VVB1 AC004854.2-201ENST00000608450 1441 ntBASIC18.67■□□□□ 0.58
NHLRC1Q6VVB1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
NHLRC1Q6VVB1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NHLRC1Q6VVB1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NHLRC1Q6VVB1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.67■□□□□ 0.58
NHLRC1Q6VVB1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.67■□□□□ 0.58
NHLRC1Q6VVB1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NHLRC1Q6VVB1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.67■□□□□ 0.58
NHLRC1Q6VVB1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NHLRC1Q6VVB1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.67■□□□□ 0.58
NHLRC1Q6VVB1 AC010141.2-201ENST00000452426 721 ntBASIC18.67■□□□□ 0.58
NHLRC1Q6VVB1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NHLRC1Q6VVB1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.67■□□□□ 0.58
NHLRC1Q6VVB1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
NHLRC1Q6VVB1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NHLRC1Q6VVB1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
NHLRC1Q6VVB1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NHLRC1Q6VVB1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NHLRC1Q6VVB1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NHLRC1Q6VVB1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
NHLRC1Q6VVB1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.66■□□□□ 0.58
NHLRC1Q6VVB1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
NHLRC1Q6VVB1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NHLRC1Q6VVB1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NHLRC1Q6VVB1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NHLRC1Q6VVB1 AC087623.3-201ENST00000607047 1098 ntBASIC18.66■□□□□ 0.58
NHLRC1Q6VVB1 AC104187.1-201ENST00000607510 612 ntBASIC18.66■□□□□ 0.58
NHLRC1Q6VVB1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.66■□□□□ 0.58
NHLRC1Q6VVB1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
NHLRC1Q6VVB1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.66■□□□□ 0.58
NHLRC1Q6VVB1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NHLRC1Q6VVB1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NHLRC1Q6VVB1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
NHLRC1Q6VVB1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NHLRC1Q6VVB1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NHLRC1Q6VVB1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NHLRC1Q6VVB1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NHLRC1Q6VVB1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NHLRC1Q6VVB1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NHLRC1Q6VVB1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.65■□□□□ 0.58
NHLRC1Q6VVB1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms