Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.94■□□□□ 0.62
NIPAL3Q6P499 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.94■□□□□ 0.62
NIPAL3Q6P499 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.94■□□□□ 0.62
NIPAL3Q6P499 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NIPAL3Q6P499 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.94■□□□□ 0.62
NIPAL3Q6P499 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NIPAL3Q6P499 LINC02228-203ENST00000641970 1355 ntBASIC18.93■□□□□ 0.62
NIPAL3Q6P499 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
NIPAL3Q6P499 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
NIPAL3Q6P499 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NIPAL3Q6P499 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
NIPAL3Q6P499 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NIPAL3Q6P499 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NIPAL3Q6P499 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NIPAL3Q6P499 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
NIPAL3Q6P499 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NIPAL3Q6P499 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.93■□□□□ 0.62
NIPAL3Q6P499 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
NIPAL3Q6P499 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
NIPAL3Q6P499 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NIPAL3Q6P499 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NIPAL3Q6P499 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.93■□□□□ 0.62
NIPAL3Q6P499 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NIPAL3Q6P499 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NIPAL3Q6P499 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.93■□□□□ 0.62
NIPAL3Q6P499 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NIPAL3Q6P499 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NIPAL3Q6P499 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NIPAL3Q6P499 AC055733.4-201ENST00000638462 1354 ntBASIC18.93■□□□□ 0.62
NIPAL3Q6P499 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
NIPAL3Q6P499 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
NIPAL3Q6P499 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NIPAL3Q6P499 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NIPAL3Q6P499 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NIPAL3Q6P499 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NIPAL3Q6P499 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NIPAL3Q6P499 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.92■□□□□ 0.62
NIPAL3Q6P499 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NIPAL3Q6P499 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NIPAL3Q6P499 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
NIPAL3Q6P499 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.91■□□□□ 0.62
NIPAL3Q6P499 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NIPAL3Q6P499 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NIPAL3Q6P499 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NIPAL3Q6P499 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NIPAL3Q6P499 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.91■□□□□ 0.62
NIPAL3Q6P499 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NIPAL3Q6P499 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.91■□□□□ 0.62
NIPAL3Q6P499 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.91■□□□□ 0.62
NIPAL3Q6P499 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.91■□□□□ 0.62
NIPAL3Q6P499 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NIPAL3Q6P499 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NIPAL3Q6P499 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
NIPAL3Q6P499 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.91■□□□□ 0.62
NIPAL3Q6P499 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.91■□□□□ 0.62
NIPAL3Q6P499 AC123595.1-201ENST00000440769 1046 ntBASIC18.91■□□□□ 0.62
NIPAL3Q6P499 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.91■□□□□ 0.62
NIPAL3Q6P499 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NIPAL3Q6P499 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NIPAL3Q6P499 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
NIPAL3Q6P499 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NIPAL3Q6P499 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NIPAL3Q6P499 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NIPAL3Q6P499 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
NIPAL3Q6P499 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NIPAL3Q6P499 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NIPAL3Q6P499 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NIPAL3Q6P499 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NIPAL3Q6P499 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NIPAL3Q6P499 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
NIPAL3Q6P499 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NIPAL3Q6P499 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.9■□□□□ 0.62
NIPAL3Q6P499 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
NIPAL3Q6P499 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NIPAL3Q6P499 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NIPAL3Q6P499 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
NIPAL3Q6P499 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NIPAL3Q6P499 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.9■□□□□ 0.62
NIPAL3Q6P499 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
NIPAL3Q6P499 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NIPAL3Q6P499 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NIPAL3Q6P499 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NIPAL3Q6P499 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NIPAL3Q6P499 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
NIPAL3Q6P499 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.89■□□□□ 0.62
NIPAL3Q6P499 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.89■□□□□ 0.62
NIPAL3Q6P499 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NIPAL3Q6P499 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NIPAL3Q6P499 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.89■□□□□ 0.61
NIPAL3Q6P499 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NIPAL3Q6P499 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NIPAL3Q6P499 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NIPAL3Q6P499 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NIPAL3Q6P499 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.89■□□□□ 0.61
NIPAL3Q6P499 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NIPAL3Q6P499 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.89■□□□□ 0.61
NIPAL3Q6P499 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.89■□□□□ 0.61
NIPAL3Q6P499 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.89■□□□□ 0.61
NIPAL3Q6P499 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
NIPAL3Q6P499 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms