Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CDC42BPAQ5VT25 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CDC42BPAQ5VT25 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CDC42BPAQ5VT25 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC31.91■■■□□ 2.7
CDC42BPAQ5VT25 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC31.9■■■□□ 2.7
CDC42BPAQ5VT25 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC31.9■■■□□ 2.7
CDC42BPAQ5VT25 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CDC42BPAQ5VT25 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CDC42BPAQ5VT25 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC31.9■■■□□ 2.7
CDC42BPAQ5VT25 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
CDC42BPAQ5VT25 RPPH1-201ENST00000516869 333 ntBASIC31.9■■■□□ 2.7
CDC42BPAQ5VT25 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC31.9■■■□□ 2.7
CDC42BPAQ5VT25 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
CDC42BPAQ5VT25 FAM197Y4-202ENST00000622692 608 ntBASIC31.9■■■□□ 2.7
CDC42BPAQ5VT25 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CDC42BPAQ5VT25 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC31.9■■■□□ 2.7
CDC42BPAQ5VT25 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC31.89■■■□□ 2.7
CDC42BPAQ5VT25 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
CDC42BPAQ5VT25 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC31.89■■■□□ 2.7
CDC42BPAQ5VT25 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
CDC42BPAQ5VT25 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC31.89■■■□□ 2.7
CDC42BPAQ5VT25 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CDC42BPAQ5VT25 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC31.89■■■□□ 2.7
CDC42BPAQ5VT25 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.7
CDC42BPAQ5VT25 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CDC42BPAQ5VT25 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
CDC42BPAQ5VT25 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC31.89■■■□□ 2.7
CDC42BPAQ5VT25 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC31.89■■■□□ 2.7
CDC42BPAQ5VT25 AC087633.2-202ENST00000565166 1439 ntBASIC31.89■■■□□ 2.7
CDC42BPAQ5VT25 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CDC42BPAQ5VT25 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC31.89■■■□□ 2.7
CDC42BPAQ5VT25 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC31.89■■■□□ 2.7
CDC42BPAQ5VT25 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC31.89■■■□□ 2.69
CDC42BPAQ5VT25 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC31.89■■■□□ 2.69
CDC42BPAQ5VT25 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC31.89■■■□□ 2.69
CDC42BPAQ5VT25 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CDC42BPAQ5VT25 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CDC42BPAQ5VT25 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC31.88■■■□□ 2.69
CDC42BPAQ5VT25 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC31.88■■■□□ 2.69
CDC42BPAQ5VT25 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CDC42BPAQ5VT25 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
CDC42BPAQ5VT25 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC31.88■■■□□ 2.69
CDC42BPAQ5VT25 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CDC42BPAQ5VT25 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
CDC42BPAQ5VT25 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC31.87■■■□□ 2.69
CDC42BPAQ5VT25 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CDC42BPAQ5VT25 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC31.87■■■□□ 2.69
CDC42BPAQ5VT25 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
CDC42BPAQ5VT25 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC31.87■■■□□ 2.69
CDC42BPAQ5VT25 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
CDC42BPAQ5VT25 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CDC42BPAQ5VT25 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
CDC42BPAQ5VT25 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC31.86■■■□□ 2.69
CDC42BPAQ5VT25 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC31.86■■■□□ 2.69
CDC42BPAQ5VT25 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC31.86■■■□□ 2.69
CDC42BPAQ5VT25 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC31.86■■■□□ 2.69
CDC42BPAQ5VT25 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CDC42BPAQ5VT25 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CDC42BPAQ5VT25 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC31.86■■■□□ 2.69
CDC42BPAQ5VT25 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CDC42BPAQ5VT25 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC31.86■■■□□ 2.69
CDC42BPAQ5VT25 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC31.86■■■□□ 2.69
CDC42BPAQ5VT25 STX5-203ENST00000394690 1568 ntTSL 5 BASIC31.86■■■□□ 2.69
CDC42BPAQ5VT25 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CDC42BPAQ5VT25 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CDC42BPAQ5VT25 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
CDC42BPAQ5VT25 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CDC42BPAQ5VT25 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC31.85■■■□□ 2.69
CDC42BPAQ5VT25 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CDC42BPAQ5VT25 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
CDC42BPAQ5VT25 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CDC42BPAQ5VT25 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CDC42BPAQ5VT25 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC31.85■■■□□ 2.69
CDC42BPAQ5VT25 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC31.85■■■□□ 2.69
CDC42BPAQ5VT25 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CDC42BPAQ5VT25 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
CDC42BPAQ5VT25 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC31.84■■■□□ 2.69
CDC42BPAQ5VT25 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CDC42BPAQ5VT25 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CDC42BPAQ5VT25 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
CDC42BPAQ5VT25 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC31.84■■■□□ 2.69
CDC42BPAQ5VT25 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC31.84■■■□□ 2.69
CDC42BPAQ5VT25 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC31.84■■■□□ 2.69
CDC42BPAQ5VT25 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
CDC42BPAQ5VT25 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC31.83■■■□□ 2.69
CDC42BPAQ5VT25 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC31.83■■■□□ 2.69
CDC42BPAQ5VT25 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC31.83■■■□□ 2.69
CDC42BPAQ5VT25 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC31.83■■■□□ 2.69
CDC42BPAQ5VT25 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC31.83■■■□□ 2.69
CDC42BPAQ5VT25 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC31.83■■■□□ 2.69
CDC42BPAQ5VT25 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CDC42BPAQ5VT25 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
CDC42BPAQ5VT25 POM121L13P-201ENST00000422362 380 ntBASIC31.83■■■□□ 2.69
CDC42BPAQ5VT25 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC31.82■■■□□ 2.68
CDC42BPAQ5VT25 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CDC42BPAQ5VT25 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC31.82■■■□□ 2.68
CDC42BPAQ5VT25 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CDC42BPAQ5VT25 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
CDC42BPAQ5VT25 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC31.82■■■□□ 2.68
CDC42BPAQ5VT25 MDFI-202ENST00000373050 809 ntTSL 2 BASIC31.82■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms