Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
TTC39AQ5SRH9 AL109923.1-201ENST00000618799 583 ntBASIC25.44■■□□□ 1.66
TTC39AQ5SRH9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
TTC39AQ5SRH9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
TTC39AQ5SRH9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
TTC39AQ5SRH9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
TTC39AQ5SRH9 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
TTC39AQ5SRH9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC25.43■■□□□ 1.66
TTC39AQ5SRH9 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TTC39AQ5SRH9 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
TTC39AQ5SRH9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TTC39AQ5SRH9 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
TTC39AQ5SRH9 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TTC39AQ5SRH9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
TTC39AQ5SRH9 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
TTC39AQ5SRH9 BET1L-204ENST00000410108 637 ntTSL 3 BASIC25.43■■□□□ 1.66
TTC39AQ5SRH9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
TTC39AQ5SRH9 AC104771.1-201ENST00000603335 964 ntBASIC25.43■■□□□ 1.66
TTC39AQ5SRH9 AL591742.1-201ENST00000604433 565 ntBASIC25.43■■□□□ 1.66
TTC39AQ5SRH9 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC25.43■■□□□ 1.66
TTC39AQ5SRH9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
TTC39AQ5SRH9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
TTC39AQ5SRH9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC25.43■■□□□ 1.66
TTC39AQ5SRH9 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TTC39AQ5SRH9 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
TTC39AQ5SRH9 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
TTC39AQ5SRH9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TTC39AQ5SRH9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
TTC39AQ5SRH9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC25.42■■□□□ 1.66
TTC39AQ5SRH9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC25.42■■□□□ 1.66
TTC39AQ5SRH9 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC25.42■■□□□ 1.66
TTC39AQ5SRH9 METTL15-202ENST00000403099 795 ntTSL 5 BASIC25.42■■□□□ 1.66
TTC39AQ5SRH9 AC091799.1-201ENST00000422823 811 ntBASIC25.42■■□□□ 1.66
TTC39AQ5SRH9 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC25.42■■□□□ 1.66
TTC39AQ5SRH9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC25.42■■□□□ 1.66
TTC39AQ5SRH9 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC25.42■■□□□ 1.66
TTC39AQ5SRH9 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC25.42■■□□□ 1.66
TTC39AQ5SRH9 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TTC39AQ5SRH9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
TTC39AQ5SRH9 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC25.42■■□□□ 1.66
TTC39AQ5SRH9 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC25.42■■□□□ 1.66
TTC39AQ5SRH9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TTC39AQ5SRH9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC25.42■■□□□ 1.66
TTC39AQ5SRH9 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC25.42■■□□□ 1.66
TTC39AQ5SRH9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC25.42■■□□□ 1.66
TTC39AQ5SRH9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
TTC39AQ5SRH9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TTC39AQ5SRH9 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TTC39AQ5SRH9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TTC39AQ5SRH9 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC25.41■■□□□ 1.66
TTC39AQ5SRH9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TTC39AQ5SRH9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TTC39AQ5SRH9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC25.41■■□□□ 1.66
TTC39AQ5SRH9 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
TTC39AQ5SRH9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
TTC39AQ5SRH9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
TTC39AQ5SRH9 OAS3-207ENST00000551007 998 ntTSL 2 BASIC25.41■■□□□ 1.66
TTC39AQ5SRH9 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC25.41■■□□□ 1.66
TTC39AQ5SRH9 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC25.41■■□□□ 1.66
TTC39AQ5SRH9 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TTC39AQ5SRH9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC25.41■■□□□ 1.66
TTC39AQ5SRH9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC25.41■■□□□ 1.66
TTC39AQ5SRH9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
TTC39AQ5SRH9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TTC39AQ5SRH9 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
TTC39AQ5SRH9 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
TTC39AQ5SRH9 AF201337.1-201ENST00000520239 748 ntBASIC25.4■■□□□ 1.66
TTC39AQ5SRH9 AC105036.2-201ENST00000569468 176 ntBASIC25.4■■□□□ 1.66
TTC39AQ5SRH9 Z98882.1-201ENST00000622160 2253 ntBASIC25.4■■□□□ 1.66
TTC39AQ5SRH9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC25.4■■□□□ 1.66
TTC39AQ5SRH9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TTC39AQ5SRH9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
TTC39AQ5SRH9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.66
TTC39AQ5SRH9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TTC39AQ5SRH9 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC25.39■■□□□ 1.66
TTC39AQ5SRH9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TTC39AQ5SRH9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TTC39AQ5SRH9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TTC39AQ5SRH9 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TTC39AQ5SRH9 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
TTC39AQ5SRH9 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TTC39AQ5SRH9 AC133552.2-202ENST00000575694 574 ntBASIC25.39■■□□□ 1.66
TTC39AQ5SRH9 AC069236.1-201ENST00000604339 616 ntBASIC25.39■■□□□ 1.66
TTC39AQ5SRH9 AC008694.1-202ENST00000636953 945 ntBASIC25.39■■□□□ 1.66
TTC39AQ5SRH9 AC079834.2-201ENST00000609776 1949 ntBASIC25.39■■□□□ 1.65
TTC39AQ5SRH9 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
TTC39AQ5SRH9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
TTC39AQ5SRH9 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.65
TTC39AQ5SRH9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC25.39■■□□□ 1.65
TTC39AQ5SRH9 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC25.38■■□□□ 1.65
TTC39AQ5SRH9 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC25.38■■□□□ 1.65
TTC39AQ5SRH9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
TTC39AQ5SRH9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TTC39AQ5SRH9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
TTC39AQ5SRH9 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TTC39AQ5SRH9 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC25.38■■□□□ 1.65
TTC39AQ5SRH9 AC016405.3-201ENST00000607710 860 ntBASIC25.38■■□□□ 1.65
TTC39AQ5SRH9 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
TTC39AQ5SRH9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TTC39AQ5SRH9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms