Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LRRK2Q5S007 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRRK2Q5S007 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.34■□□□□ 0.53
LRRK2Q5S007 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRK2Q5S007 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.34■□□□□ 0.53
LRRK2Q5S007 KRT8P9-201ENST00000558927 1449 ntBASIC18.34■□□□□ 0.53
LRRK2Q5S007 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRRK2Q5S007 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRK2Q5S007 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRK2Q5S007 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LRRK2Q5S007 DUSP5P1-201ENST00000441325 1139 ntBASIC18.33■□□□□ 0.53
LRRK2Q5S007 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.33■□□□□ 0.53
LRRK2Q5S007 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRRK2Q5S007 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRRK2Q5S007 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRRK2Q5S007 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.33■□□□□ 0.53
LRRK2Q5S007 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.33■□□□□ 0.53
LRRK2Q5S007 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.33■□□□□ 0.53
LRRK2Q5S007 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRRK2Q5S007 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRRK2Q5S007 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.33■□□□□ 0.53
LRRK2Q5S007 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRK2Q5S007 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.33■□□□□ 0.52
LRRK2Q5S007 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRK2Q5S007 MCRIP2P1-201ENST00000394346 511 ntBASIC18.33■□□□□ 0.52
LRRK2Q5S007 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRK2Q5S007 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.33■□□□□ 0.52
LRRK2Q5S007 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
LRRK2Q5S007 AC008175.2-201ENST00000612840 297 ntBASIC18.33■□□□□ 0.52
LRRK2Q5S007 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
LRRK2Q5S007 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.33■□□□□ 0.52
LRRK2Q5S007 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.33■□□□□ 0.52
LRRK2Q5S007 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRK2Q5S007 AC145676.1-201ENST00000514988 2004 ntBASIC18.33■□□□□ 0.52
LRRK2Q5S007 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.32■□□□□ 0.52
LRRK2Q5S007 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRK2Q5S007 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.32■□□□□ 0.52
LRRK2Q5S007 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.32■□□□□ 0.52
LRRK2Q5S007 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.32■□□□□ 0.52
LRRK2Q5S007 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.32■□□□□ 0.52
LRRK2Q5S007 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LRRK2Q5S007 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRK2Q5S007 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRK2Q5S007 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.32■□□□□ 0.52
LRRK2Q5S007 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.32■□□□□ 0.52
LRRK2Q5S007 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRK2Q5S007 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LRRK2Q5S007 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.32■□□□□ 0.52
LRRK2Q5S007 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRK2Q5S007 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRK2Q5S007 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LRRK2Q5S007 TERF1P1-201ENST00000311003 1181 ntBASIC18.31■□□□□ 0.52
LRRK2Q5S007 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRRK2Q5S007 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LRRK2Q5S007 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
LRRK2Q5S007 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.31■□□□□ 0.52
LRRK2Q5S007 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRRK2Q5S007 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRK2Q5S007 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRK2Q5S007 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.31■□□□□ 0.52
LRRK2Q5S007 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRRK2Q5S007 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRK2Q5S007 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRK2Q5S007 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRK2Q5S007 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.31■□□□□ 0.52
LRRK2Q5S007 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.31■□□□□ 0.52
LRRK2Q5S007 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.31■□□□□ 0.52
LRRK2Q5S007 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRK2Q5S007 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.31■□□□□ 0.52
LRRK2Q5S007 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRK2Q5S007 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRRK2Q5S007 AC073508.3-201ENST00000619697 1419 ntBASIC18.31■□□□□ 0.52
LRRK2Q5S007 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRK2Q5S007 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
LRRK2Q5S007 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRK2Q5S007 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRK2Q5S007 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.3■□□□□ 0.52
LRRK2Q5S007 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
LRRK2Q5S007 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.3■□□□□ 0.52
LRRK2Q5S007 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRK2Q5S007 AC005363.2-201ENST00000618631 242 ntBASIC18.3■□□□□ 0.52
LRRK2Q5S007 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRK2Q5S007 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRK2Q5S007 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
LRRK2Q5S007 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LRRK2Q5S007 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRRK2Q5S007 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.3■□□□□ 0.52
LRRK2Q5S007 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.3■□□□□ 0.52
LRRK2Q5S007 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.3■□□□□ 0.52
LRRK2Q5S007 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LRRK2Q5S007 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRRK2Q5S007 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRK2Q5S007 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRK2Q5S007 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRK2Q5S007 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRRK2Q5S007 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.29■□□□□ 0.52
LRRK2Q5S007 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
LRRK2Q5S007 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRK2Q5S007 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRK2Q5S007 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms