Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SF3A2Q15428 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SF3A2Q15428 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SF3A2Q15428 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SF3A2Q15428 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SF3A2Q15428 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.67■□□□□ 0.9
SF3A2Q15428 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.67■□□□□ 0.9
SF3A2Q15428 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.67■□□□□ 0.9
SF3A2Q15428 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.67■□□□□ 0.9
SF3A2Q15428 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SF3A2Q15428 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SF3A2Q15428 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
SF3A2Q15428 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SF3A2Q15428 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SF3A2Q15428 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.67■□□□□ 0.9
SF3A2Q15428 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SF3A2Q15428 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SF3A2Q15428 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SF3A2Q15428 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.66■□□□□ 0.9
SF3A2Q15428 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.66■□□□□ 0.9
SF3A2Q15428 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.66■□□□□ 0.9
SF3A2Q15428 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SF3A2Q15428 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.66■□□□□ 0.9
SF3A2Q15428 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.66■□□□□ 0.9
SF3A2Q15428 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SF3A2Q15428 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SF3A2Q15428 AC092368.3-202ENST00000574180 1591 ntBASIC20.66■□□□□ 0.9
SF3A2Q15428 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SF3A2Q15428 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SF3A2Q15428 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.66■□□□□ 0.9
SF3A2Q15428 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SF3A2Q15428 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SF3A2Q15428 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SF3A2Q15428 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SF3A2Q15428 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SF3A2Q15428 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SF3A2Q15428 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SF3A2Q15428 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SF3A2Q15428 AC061975.6-201ENST00000579045 1553 ntBASIC20.65■□□□□ 0.9
SF3A2Q15428 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SF3A2Q15428 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.65■□□□□ 0.9
SF3A2Q15428 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SF3A2Q15428 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.65■□□□□ 0.9
SF3A2Q15428 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
SF3A2Q15428 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.65■□□□□ 0.9
SF3A2Q15428 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SF3A2Q15428 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SF3A2Q15428 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SF3A2Q15428 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SF3A2Q15428 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SF3A2Q15428 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SF3A2Q15428 TSPY7P-201ENST00000431358 1114 ntBASIC20.64■□□□□ 0.89
SF3A2Q15428 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.64■□□□□ 0.89
SF3A2Q15428 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.89
SF3A2Q15428 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SF3A2Q15428 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.64■□□□□ 0.89
SF3A2Q15428 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.64■□□□□ 0.89
SF3A2Q15428 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SF3A2Q15428 AC069544.1-201ENST00000609399 999 ntBASIC20.64■□□□□ 0.89
SF3A2Q15428 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SF3A2Q15428 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SF3A2Q15428 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.64■□□□□ 0.89
SF3A2Q15428 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SF3A2Q15428 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SF3A2Q15428 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.63■□□□□ 0.89
SF3A2Q15428 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SF3A2Q15428 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.63■□□□□ 0.89
SF3A2Q15428 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SF3A2Q15428 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SF3A2Q15428 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SF3A2Q15428 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.63■□□□□ 0.89
SF3A2Q15428 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SF3A2Q15428 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SF3A2Q15428 SOX15-203ENST00000570788 1093 ntBASIC20.63■□□□□ 0.89
SF3A2Q15428 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.63■□□□□ 0.89
SF3A2Q15428 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.63■□□□□ 0.89
SF3A2Q15428 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SF3A2Q15428 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
SF3A2Q15428 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SF3A2Q15428 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SF3A2Q15428 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SF3A2Q15428 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.63■□□□□ 0.89
SF3A2Q15428 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SF3A2Q15428 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.62■□□□□ 0.89
SF3A2Q15428 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SF3A2Q15428 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SF3A2Q15428 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
SF3A2Q15428 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
SF3A2Q15428 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SF3A2Q15428 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SF3A2Q15428 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
SF3A2Q15428 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.62■□□□□ 0.89
SF3A2Q15428 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.62■□□□□ 0.89
SF3A2Q15428 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SF3A2Q15428 AC133561.5-201ENST00000635547 218 ntBASIC20.62■□□□□ 0.89
SF3A2Q15428 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SF3A2Q15428 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.62■□□□□ 0.89
SF3A2Q15428 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SF3A2Q15428 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.62■□□□□ 0.89
SF3A2Q15428 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms