Protein–RNA interactions for Protein: Q12391

TY1A-NL1, Transposon Ty1-NL1 Gag polyprotein, yeastyeast

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-NL1Q12391 YAL044W-AYAL044W-A 333 nt4.28□□□□□ -1.72
TY1A-NL1Q12391 INN1YNL152W 1230 nt4.28□□□□□ -1.72
TY1A-NL1Q12391 YRR1YOR162C 2433 nt4.28□□□□□ -1.72
TY1A-NL1Q12391 DIT2YDR402C 1470 nt4.28□□□□□ -1.72
TY1A-NL1Q12391 YJL132WYJL132W 2253 nt4.28□□□□□ -1.72
TY1A-NL1Q12391 MKT1YNL085W 2493 nt4.27□□□□□ -1.73
TY1A-NL1Q12391 MNN1YER001W 2289 nt4.27□□□□□ -1.73
TY1A-NL1Q12391 YFL063WYFL063W 456 nt4.27□□□□□ -1.73
TY1A-NL1Q12391 RPB9YGL070C 369 nt4.27□□□□□ -1.73
TY1A-NL1Q12391 RPL11BYGR085C 525 nt4.27□□□□□ -1.73
TY1A-NL1Q12391 GAT4YIR013C 366 nt4.27□□□□□ -1.73
TY1A-NL1Q12391 YNL338WYNL338W 159 nt4.27□□□□□ -1.73
TY1A-NL1Q12391 RPL11AYPR102C 525 nt4.27□□□□□ -1.73
TY1A-NL1Q12391 GDT1YBR187W 843 nt4.27□□□□□ -1.73
TY1A-NL1Q12391 APL6YGR261C 2430 nt4.27□□□□□ -1.73
TY1A-NL1Q12391 DIE2YGR227W 1578 nt4.27□□□□□ -1.73
TY1A-NL1Q12391 SAP155YFR040W 3009 nt4.27□□□□□ -1.73
TY1A-NL1Q12391 MED1YPR070W 1701 nt4.26□□□□□ -1.73
TY1A-NL1Q12391 MDM36YPR083W 1740 nt4.26□□□□□ -1.73
TY1A-NL1Q12391 PXA1YPL147W 2613 nt4.26□□□□□ -1.73
TY1A-NL1Q12391 SSB2YNL209W 1842 nt4.26□□□□□ -1.73
TY1A-NL1Q12391 YFL064CYFL064C 525 nt4.26□□□□□ -1.73
TY1A-NL1Q12391 CNB1YKL190W 528 nt4.26□□□□□ -1.73
TY1A-NL1Q12391 NIC96YFR002W 2520 nt4.26□□□□□ -1.73
TY1A-NL1Q12391 GMC1YDR506C 1827 nt4.25□□□□□ -1.73
TY1A-NL1Q12391 PAC1YOR269W 1485 nt4.25□□□□□ -1.73
TY1A-NL1Q12391 YDR133CYDR133C 336 nt4.25□□□□□ -1.73
TY1A-NL1Q12391 GPI8YDR331W 1236 nt4.25□□□□□ -1.73
TY1A-NL1Q12391 JAC1YGL018C 555 nt4.25□□□□□ -1.73
TY1A-NL1Q12391 REC104YHR157W 549 nt4.25□□□□□ -1.73
TY1A-NL1Q12391 RPS4BYHR203C 786 nt4.25□□□□□ -1.73
TY1A-NL1Q12391 GPP1YIL053W 753 nt4.25□□□□□ -1.73
TY1A-NL1Q12391 INO4YOL108C 456 nt4.25□□□□□ -1.73
TY1A-NL1Q12391 HSP26YBR072W 645 nt4.25□□□□□ -1.73
TY1A-NL1Q12391 UTP15YMR093W 1542 nt4.25□□□□□ -1.73
TY1A-NL1Q12391 GAL4YPL248C 2646 nt4.24□□□□□ -1.73
TY1A-NL1Q12391 AIM26YKL037W 357 nt4.24□□□□□ -1.73
TY1A-NL1Q12391 YLR302CYLR302C 363 nt4.24□□□□□ -1.73
TY1A-NL1Q12391 YBL006W-AYBL006W-A 150 nt4.24□□□□□ -1.73
TY1A-NL1Q12391 SSN8YNL025C 972 nt4.24□□□□□ -1.73
TY1A-NL1Q12391 THI7YLR237W 1797 nt4.24□□□□□ -1.73
TY1A-NL1Q12391 STV1YMR054W 2673 nt4.24□□□□□ -1.73
TY1A-NL1Q12391 PSP1YDR505C 2526 nt4.24□□□□□ -1.73
TY1A-NL1Q12391 HUL5YGL141W 2733 nt4.23□□□□□ -1.73
TY1A-NL1Q12391 RIM13YMR154C 2184 nt4.23□□□□□ -1.73
TY1A-NL1Q12391 MCM2YBL023C 2607 nt4.23□□□□□ -1.73
TY1A-NL1Q12391 RIP1YEL024W 648 nt4.23□□□□□ -1.73
TY1A-NL1Q12391 CAJ1YER048C 1176 nt4.23□□□□□ -1.73
TY1A-NL1Q12391 YIL141WYIL141W 390 nt4.23□□□□□ -1.73
TY1A-NL1Q12391 MSL1YIR009W 336 nt4.23□□□□□ -1.73
TY1A-NL1Q12391 PAM16YJL104W 450 nt4.23□□□□□ -1.73
TY1A-NL1Q12391 RPL43BYJR094W-A 279 nt4.23□□□□□ -1.73
TY1A-NL1Q12391 FSH3YOR280C 801 nt4.23□□□□□ -1.73
TY1A-NL1Q12391 TOM5YPR133W-A 153 nt4.23□□□□□ -1.73
TY1A-NL1Q12391 SNF12YNR023W 1701 nt4.23□□□□□ -1.73
TY1A-NL1Q12391 DOA1YKL213C 2148 nt4.22□□□□□ -1.73
TY1A-NL1Q12391 HPC2YBR215W 1878 nt4.22□□□□□ -1.73
TY1A-NL1Q12391 MBP1YDL056W 2502 nt4.22□□□□□ -1.73
TY1A-NL1Q12391 YGL036WYGL036W 2730 nt4.22□□□□□ -1.73
TY1A-NL1Q12391 YDR261C-DYDR261C-D 4815 nt4.22□□□□□ -1.73
TY1A-NL1Q12391 EMI1YDR512C 564 nt4.22□□□□□ -1.73
TY1A-NL1Q12391 tK(CUU)CtK(CUU)C 73 nt4.22□□□□□ -1.73
TY1A-NL1Q12391 tK(CUU)D1tK(CUU)D1 73 nt4.22□□□□□ -1.73
TY1A-NL1Q12391 tK(CUU)D2tK(CUU)D2 73 nt4.22□□□□□ -1.73
TY1A-NL1Q12391 tK(CUU)E1tK(CUU)E1 73 nt4.22□□□□□ -1.73
TY1A-NL1Q12391 tK(CUU)E2tK(CUU)E2 73 nt4.22□□□□□ -1.73
TY1A-NL1Q12391 tK(CUU)FtK(CUU)F 73 nt4.22□□□□□ -1.73
TY1A-NL1Q12391 tK(CUU)G1tK(CUU)G1 73 nt4.22□□□□□ -1.73
TY1A-NL1Q12391 tK(CUU)G2tK(CUU)G2 73 nt4.22□□□□□ -1.73
TY1A-NL1Q12391 tK(CUU)G3tK(CUU)G3 73 nt4.22□□□□□ -1.73
TY1A-NL1Q12391 tK(CUU)ItK(CUU)I 73 nt4.22□□□□□ -1.73
TY1A-NL1Q12391 tK(CUU)JtK(CUU)J 73 nt4.22□□□□□ -1.73
TY1A-NL1Q12391 tK(CUU)KtK(CUU)K 73 nt4.22□□□□□ -1.73
TY1A-NL1Q12391 tK(CUU)MtK(CUU)M 73 nt4.22□□□□□ -1.73
TY1A-NL1Q12391 tK(CUU)PtK(CUU)P 73 nt4.22□□□□□ -1.73
TY1A-NL1Q12391 HHF2YNL030W 312 nt4.22□□□□□ -1.73
TY1A-NL1Q12391 YPR059CYPR059C 387 nt4.22□□□□□ -1.73
TY1A-NL1Q12391 DPB3YBR278W 606 nt4.22□□□□□ -1.73
TY1A-NL1Q12391 UTP13YLR222C 2454 nt4.22□□□□□ -1.73
TY1A-NL1Q12391 AKL1YBR059C 3327 nt4.22□□□□□ -1.73
TY1A-NL1Q12391 IMD4YML056C 1575 nt4.22□□□□□ -1.73
TY1A-NL1Q12391 VHC1YBR235W 3363 nt4.22□□□□□ -1.73
TY1A-NL1Q12391 ATM1YMR301C 2073 nt4.22□□□□□ -1.73
TY1A-NL1Q12391 YER158CYER158C 1722 nt4.21□□□□□ -1.73
TY1A-NL1Q12391 MDR1YGR100W 2853 nt4.21□□□□□ -1.73
TY1A-NL1Q12391 YDL228CYDL228C 642 nt4.21□□□□□ -1.74
TY1A-NL1Q12391 YDR545C-AYDR545C-A 480 nt4.21□□□□□ -1.74
TY1A-NL1Q12391 APQ12YIL040W 417 nt4.21□□□□□ -1.74
TY1A-NL1Q12391 RPL9BYNL067W 576 nt4.21□□□□□ -1.74
TY1A-NL1Q12391 PGA1YNL158W 597 nt4.21□□□□□ -1.74
TY1A-NL1Q12391 YOR385WYOR385W 873 nt4.21□□□□□ -1.74
TY1A-NL1Q12391 KRS1YDR037W 1776 nt4.21□□□□□ -1.74
TY1A-NL1Q12391 BAR1YIL015W 1764 nt4.21□□□□□ -1.74
TY1A-NL1Q12391 RPN6YDL097C 1305 nt4.21□□□□□ -1.74
TY1A-NL1Q12391 ARN1YHL040C 1884 nt4.2□□□□□ -1.74
TY1A-NL1Q12391 YOL019WYOL019W 1656 nt4.2□□□□□ -1.74
TY1A-NL1Q12391 YMR196WYMR196W 3267 nt4.2□□□□□ -1.74
TY1A-NL1Q12391 RPA34YJL148W 702 nt4.2□□□□□ -1.74
TY1A-NL1Q12391 ILV5YLR355C 1188 nt4.2□□□□□ -1.74
TY1A-NL1Q12391 IST1YNL265C 897 nt4.2□□□□□ -1.74
Retrieved 100 of 7,029 protein–RNA pairs in 112.8 ms