Protein–RNA interactions for Protein: Q12348

RRI2, COP9 signalosome complex subunit 10, yeastyeast

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRI2Q12348 RPC25YKL144C 639 nt3.34□□□□□ -1.87
RRI2Q12348 SMD2YLR275W 333 nt3.34□□□□□ -1.87
RRI2Q12348 THI80YOR143C 960 nt3.34□□□□□ -1.87
RRI2Q12348 snR24snR24 89 nt3.34□□□□□ -1.87
RRI2Q12348 PUF6YDR496C 1971 nt3.34□□□□□ -1.88
RRI2Q12348 BIT61YJL058C 1632 nt3.33□□□□□ -1.88
RRI2Q12348 ARK1YNL020C 1917 nt3.33□□□□□ -1.88
RRI2Q12348 RMD6YEL072W 696 nt3.33□□□□□ -1.88
RRI2Q12348 SHG1YBR258C 429 nt3.33□□□□□ -1.88
RRI2Q12348 ICR1ICR1 3199 nt3.33□□□□□ -1.88
RRI2Q12348 TFB1YDR311W 1929 nt3.32□□□□□ -1.88
RRI2Q12348 SRB4YER022W 2064 nt3.32□□□□□ -1.88
RRI2Q12348 USE1YGL098W 738 nt3.32□□□□□ -1.88
RRI2Q12348 PEF1YGR058W 1008 nt3.32□□□□□ -1.88
RRI2Q12348 TCD1YHR003C 1290 nt3.32□□□□□ -1.88
RRI2Q12348 TPK3YKL166C 1197 nt3.32□□□□□ -1.88
RRI2Q12348 YLR257WYLR257W 966 nt3.32□□□□□ -1.88
RRI2Q12348 YML037CYML037C 1023 nt3.32□□□□□ -1.88
RRI2Q12348 INP1YMR204C 1263 nt3.32□□□□□ -1.88
RRI2Q12348 END3YNL084C 1050 nt3.32□□□□□ -1.88
RRI2Q12348 BRE5YNR051C 1548 nt3.31□□□□□ -1.88
RRI2Q12348 TAF2YCR042C 4224 nt3.31□□□□□ -1.88
RRI2Q12348 BTN2YGR142W 1233 nt3.31□□□□□ -1.88
RRI2Q12348 RSR1YGR152C 819 nt3.31□□□□□ -1.88
RRI2Q12348 ATG27YJL178C 816 nt3.31□□□□□ -1.88
RRI2Q12348 RRP15YPR143W 753 nt3.31□□□□□ -1.88
RRI2Q12348 ITC1YGL133W 3795 nt3.31□□□□□ -1.88
RRI2Q12348 PSY2YNL201C 2577 nt3.31□□□□□ -1.88
RRI2Q12348 Q0255Q0255 1419 nt3.3□□□□□ -1.88
RRI2Q12348 YPR1YDR368W 939 nt3.3□□□□□ -1.88
RRI2Q12348 YER039C-AYER039C-A 219 nt3.3□□□□□ -1.88
RRI2Q12348 SFT1YKL006C-A 294 nt3.3□□□□□ -1.88
RRI2Q12348 YLR297WYLR297W 390 nt3.3□□□□□ -1.88
RRI2Q12348 AIM36YMR157C 768 nt3.3□□□□□ -1.88
RRI2Q12348 YMR181CYMR181C 465 nt3.3□□□□□ -1.88
RRI2Q12348 RPL16BYNL069C 597 nt3.3□□□□□ -1.88
RRI2Q12348 NGL1YOL042W 1092 nt3.3□□□□□ -1.88
RRI2Q12348 RPL33AYPL143W 324 nt3.3□□□□□ -1.88
RRI2Q12348 VPS64YDR200C 1815 nt3.3□□□□□ -1.88
RRI2Q12348 YPP1YGR198W 2454 nt3.3□□□□□ -1.88
RRI2Q12348 SLK19YOR195W 2466 nt3.3□□□□□ -1.88
RRI2Q12348 DBF20YPR111W 1695 nt3.3□□□□□ -1.88
RRI2Q12348 RAV2YDR202C 1056 nt3.29□□□□□ -1.88
RRI2Q12348 BAT1YHR208W 1182 nt3.29□□□□□ -1.88
RRI2Q12348 GIM5YML094W 492 nt3.29□□□□□ -1.88
RRI2Q12348 GRE2YOL151W 1029 nt3.29□□□□□ -1.88
RRI2Q12348 YPL276WYPL276W 438 nt3.29□□□□□ -1.88
RRI2Q12348 RGR1YLR071C 3249 nt3.29□□□□□ -1.88
RRI2Q12348 BPT1YLL015W 4680 nt3.29□□□□□ -1.88
RRI2Q12348 DRS2YAL026C 4068 nt3.29□□□□□ -1.88
RRI2Q12348 ASI3YNL008C 2031 nt3.29□□□□□ -1.88
RRI2Q12348 ERT1YBR239C 1590 nt3.29□□□□□ -1.88
RRI2Q12348 KEI1YDR367W 666 nt3.28□□□□□ -1.88
RRI2Q12348 YDR442WYDR442W 393 nt3.28□□□□□ -1.88
RRI2Q12348 YIL054WYIL054W 318 nt3.28□□□□□ -1.88
RRI2Q12348 LIP2YLR239C 987 nt3.28□□□□□ -1.88
RRI2Q12348 YPT6YLR262C 648 nt3.28□□□□□ -1.88
RRI2Q12348 RPL23AYBL087C 414 nt3.28□□□□□ -1.88
RRI2Q12348 TSC11YER093C 4293 nt3.28□□□□□ -1.88
RRI2Q12348 NMA111YNL123W 2994 nt3.27□□□□□ -1.89
RRI2Q12348 MET6YER091C 2304 nt3.27□□□□□ -1.89
RRI2Q12348 YCR045W-AYCR045W-A 351 nt3.27□□□□□ -1.89
RRI2Q12348 YLR217WYLR217W 324 nt3.27□□□□□ -1.89
RRI2Q12348 YPL107WYPL107W 747 nt3.27□□□□□ -1.89
RRI2Q12348 RXT2YBR095C 1293 nt3.27□□□□□ -1.89
RRI2Q12348 CDC37YDR168W 1521 nt3.27□□□□□ -1.89
RRI2Q12348 SNQ2YDR011W 4506 nt3.27□□□□□ -1.89
RRI2Q12348 RAX2YLR084C 3663 nt3.26□□□□□ -1.89
RRI2Q12348 CSR2YPR030W 3366 nt3.26□□□□□ -1.89
RRI2Q12348 snR70snR70 164 nt3.26□□□□□ -1.89
RRI2Q12348 RPL20AYMR242C 519 nt3.26□□□□□ -1.89
RRI2Q12348 ATX1YNL259C 222 nt3.26□□□□□ -1.89
RRI2Q12348 MBA1YBR185C 837 nt3.26□□□□□ -1.89
RRI2Q12348 NTC20YBR188C 423 nt3.26□□□□□ -1.89
RRI2Q12348 ANR2YKL047W 1551 nt3.25□□□□□ -1.89
RRI2Q12348 SLP1YOR154W 1764 nt3.25□□□□□ -1.89
RRI2Q12348 RSN1YMR266W 2862 nt3.25□□□□□ -1.89
RRI2Q12348 APC11YDL008W 498 nt3.25□□□□□ -1.89
RRI2Q12348 NSE4YDL105W 1209 nt3.25□□□□□ -1.89
RRI2Q12348 STE2YFL026W 1296 nt3.25□□□□□ -1.89
RRI2Q12348 THG1YGR024C 714 nt3.25□□□□□ -1.89
RRI2Q12348 CSI2YOL007C 1026 nt3.25□□□□□ -1.89
RRI2Q12348 YOR385WYOR385W 873 nt3.25□□□□□ -1.89
RRI2Q12348 SEN54YPL083C 1404 nt3.25□□□□□ -1.89
RRI2Q12348 YOL057WYOL057W 2136 nt3.25□□□□□ -1.89
RRI2Q12348 PRP8YHR165C 7242 nt3.25□□□□□ -1.89
RRI2Q12348 YDR261W-AYDR261W-A 1317 nt3.24□□□□□ -1.89
RRI2Q12348 KRE2YDR483W 1329 nt3.24□□□□□ -1.89
RRI2Q12348 VPS38YLR360W 1320 nt3.24□□□□□ -1.89
RRI2Q12348 YHR214C-DYHR214C-D 294 nt3.24□□□□□ -1.89
RRI2Q12348 tW(CCA)G1tW(CCA)G1 72 nt3.24□□□□□ -1.89
RRI2Q12348 tW(CCA)G2tW(CCA)G2 72 nt3.24□□□□□ -1.89
RRI2Q12348 tW(CCA)JtW(CCA)J 72 nt3.24□□□□□ -1.89
RRI2Q12348 tW(CCA)KtW(CCA)K 72 nt3.24□□□□□ -1.89
RRI2Q12348 tW(CCA)MtW(CCA)M 72 nt3.24□□□□□ -1.89
RRI2Q12348 tW(CCA)PtW(CCA)P 72 nt3.24□□□□□ -1.89
RRI2Q12348 FRE2YKL220C 2136 nt3.24□□□□□ -1.89
RRI2Q12348 YAR069CYAR069C 294 nt3.24□□□□□ -1.89
RRI2Q12348 UBC12YLR306W 567 nt3.24□□□□□ -1.89
RRI2Q12348 SLM4YBR077C 489 nt3.24□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 22.4 ms