Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HMGCS1Q01581 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
HMGCS1Q01581 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.06■□□□□ 0.8
HMGCS1Q01581 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HMGCS1Q01581 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.06■□□□□ 0.8
HMGCS1Q01581 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.06■□□□□ 0.8
HMGCS1Q01581 EEF1DP3-203ENST00000566025 782 ntBASIC20.06■□□□□ 0.8
HMGCS1Q01581 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HMGCS1Q01581 AL358852.1-201ENST00000623174 1268 ntBASIC20.06■□□□□ 0.8
HMGCS1Q01581 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.06■□□□□ 0.8
HMGCS1Q01581 FEM1AP1-201ENST00000431297 1995 ntBASIC20.06■□□□□ 0.8
HMGCS1Q01581 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGCS1Q01581 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HMGCS1Q01581 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.05■□□□□ 0.8
HMGCS1Q01581 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGCS1Q01581 AC019069.1-201ENST00000610008 1333 ntBASIC20.05■□□□□ 0.8
HMGCS1Q01581 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HMGCS1Q01581 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
HMGCS1Q01581 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGCS1Q01581 SLC25A24-204ENST00000569674 2357 ntBASIC20.05■□□□□ 0.8
HMGCS1Q01581 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGCS1Q01581 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGCS1Q01581 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGCS1Q01581 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
HMGCS1Q01581 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.05■□□□□ 0.8
HMGCS1Q01581 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGCS1Q01581 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
HMGCS1Q01581 AC053503.5-201ENST00000601508 636 ntBASIC20.05■□□□□ 0.8
HMGCS1Q01581 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.05■□□□□ 0.8
HMGCS1Q01581 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.05■□□□□ 0.8
HMGCS1Q01581 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.05■□□□□ 0.8
HMGCS1Q01581 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.05■□□□□ 0.8
HMGCS1Q01581 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGCS1Q01581 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
HMGCS1Q01581 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.05■□□□□ 0.8
HMGCS1Q01581 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGCS1Q01581 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.05■□□□□ 0.8
HMGCS1Q01581 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCS1Q01581 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
HMGCS1Q01581 AC061975.6-201ENST00000579045 1553 ntBASIC20.04■□□□□ 0.8
HMGCS1Q01581 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCS1Q01581 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
HMGCS1Q01581 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCS1Q01581 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCS1Q01581 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCS1Q01581 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.04■□□□□ 0.8
HMGCS1Q01581 LINC01521-201ENST00000504184 1943 ntBASIC20.04■□□□□ 0.8
HMGCS1Q01581 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.04■□□□□ 0.8
HMGCS1Q01581 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.04■□□□□ 0.8
HMGCS1Q01581 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCS1Q01581 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCS1Q01581 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
HMGCS1Q01581 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCS1Q01581 AC105265.2-201ENST00000467189 838 ntBASIC20.04■□□□□ 0.8
HMGCS1Q01581 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCS1Q01581 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
HMGCS1Q01581 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
HMGCS1Q01581 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.04■□□□□ 0.8
HMGCS1Q01581 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCS1Q01581 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
HMGCS1Q01581 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.04■□□□□ 0.8
HMGCS1Q01581 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCS1Q01581 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCS1Q01581 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCS1Q01581 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCS1Q01581 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.03■□□□□ 0.8
HMGCS1Q01581 AC092667.1-201ENST00000434301 2586 ntBASIC20.03■□□□□ 0.8
HMGCS1Q01581 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCS1Q01581 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCS1Q01581 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCS1Q01581 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCS1Q01581 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.03■□□□□ 0.8
HMGCS1Q01581 AC121338.2-201ENST00000622535 1744 ntBASIC20.03■□□□□ 0.8
HMGCS1Q01581 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.03■□□□□ 0.8
HMGCS1Q01581 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCS1Q01581 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.03■□□□□ 0.8
HMGCS1Q01581 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCS1Q01581 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
HMGCS1Q01581 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCS1Q01581 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.03■□□□□ 0.8
HMGCS1Q01581 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
HMGCS1Q01581 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCS1Q01581 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
HMGCS1Q01581 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCS1Q01581 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
HMGCS1Q01581 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMGCS1Q01581 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
HMGCS1Q01581 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
HMGCS1Q01581 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HMGCS1Q01581 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
HMGCS1Q01581 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMGCS1Q01581 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMGCS1Q01581 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
HMGCS1Q01581 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
HMGCS1Q01581 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMGCS1Q01581 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMGCS1Q01581 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.02■□□□□ 0.8
HMGCS1Q01581 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.02■□□□□ 0.8
HMGCS1Q01581 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMGCS1Q01581 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms